[pdbjlvh2]Protein Model on 5v5m_C_1_F

Protein Model on 5v5m_C_1_F_1 (TEMPLATE: 5v5m )

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ALL MOLECULES IN THE BIOLOGICAL UNIT:
[assembly_id:2]

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MOLECULES						contact sites
model	mark	query	asym_id oper (auth_asym_id)	type	description	a(query A)
1	a	A(HLAE_HUMAN)	C 1 (C)	polymer(polypeptide(L)) [276 aa]	HLA class I histocompatibility antigen, B-57 alpha chain :1B57_HUMAN
2	b		F 1 (F)	polymer(polypeptide(L)) [10 aa]	TW10	28Y 30H(Y) 80Y 83R(G) 84E 87S(N) 88A(M) 90D(A) 91T(S) 94I(T) 98N 101T(I) 105Y 116L(I) 120H(Y) 144Y 164S(T) 167K 168S(W) 173E(V) 177Q(L) 180Y 184T(L) 188W 192Y (identity: 40.0 %/77.2 %)

ALIGNMENTS

MODEL[1] Protein A "queryA" TEMPLATE:5v5m_C_1 identity=77.2%

queryA        22:GSHSLKYFHTSVSRPGRGEPRFISVGYVDDTQFVRFDNDAASPRMVPRAPWMEQEGSEYWDRETRSARDTAQIFRVNLRTLRGYYNQSEAGSHTLQWMHG: 121
                :****  ** *  *********** ************* ******* ***** **** **** ***     **  * ***    **********  * * *:
5v5m_C_1       1:GSHSMRYFYTAMSRPGRGEPRFIAVGYVDDTQFVRFDSDAASPRMAPRAPWIEQEGPEYWDGETRNMKASAQTYRENLRIALRYYNQSEAGSHIIQVMYG: 100
SecStr          :  EEEEEEEEEE  TTS S EEEEEEEETTEEEEEEETTSSS   EE SSGGGGS HHHHHHHHHHHHHHHHHHHHHHHHHHHHHT  TTS  EEEEEEE:    
ExpBur          :eebbbebebebebbeeeeeeebebebebeebebbebbbeeeeeebeeebebbeebeeebbeeebeebeebbeebbeebebbbebeeeeeeeebebebebb:    
Contact         :      b b                                                 b  bb  bb bb  b   b  b   b          b   b 

queryA       122:CELGPDGRFLRGYEQFAYDGKDYLTLNEDLRSWTAVDTAAQISEQKSNDASEAEHQRAYLEDTCVEWLHKYLEKGKETLLHLEPPKTHVTHHPISDHEAT: 221
                :*  ***** ***  * *******  ***** **** ******   *   *  **  *****  *****  *** *****    *****************:
5v5m_C_1     101:CDVGPDGRLLRGHDQSAYDGKDYIALNEDLSSWTAADTAAQITQRKWEAARVAEQLRAYLEGLCVEWLRRYLENGKETLQRADPPKTHVTHHPISDHEAT: 200
SecStr          :EEE SS  EEEEEEEEEETTEEEEEE TTSS EEESSHHHHHHHHHHHHTTHHHHHHHHHHTHHHHHHHHHHHHTHHHHT     EEEEEEEESSSSEEE:    
ExpBur          :bebbeeeeeeebbbebbbeeeebbebeeebeebeeeeebbeebbeeeeeeeebeebeeebeeebbeebeebbeebeeebeebeebeeebeeeeeeeeebb:    
Contact         :                      b                   b  bb    b   b  b   b   b   b                             

queryA       222:LRCWALGFYPAEITLTWQQDGEGHTQDTELVETRPAGDGTFQKWAAVVVPSGEEQRYTCHVQHEGLPEPVTLRWKP: 297
                :****************** ***  ************** **************************** * **** *:
5v5m_C_1     201:LRCWALGFYPAEITLTWQRDGEDQTQDTELVETRPAGDRTFQKWAAVVVPSGEEQRYTCHVQHEGLPKPLTLRWEP: 276
SecStr          :EEEEEEEESSS  EEEEEETTEE TTT EE   EE SSS EEEEEEEEEETT GGGEEEEEE TTSSS EEE    :    
ExpBur          :bebbbeebbbbebebbbeeeeeebeeebeebeeeeeeeebbebbbbbebeeeebeebbbbbebeebeeeeebeeee:

Protein Model on 5v5m_C_1_F_1 (TEMPLATE: 5v5m )

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