Protein Model on 4n8v_C_1_E_1
(TEMPLATE: 
4n8v
)Protein Model on 4n8v_C_1_E_1
(TEMPLATE: 4n8v
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DOWNLOAD: [sequence-replaced 3D model]
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ALL MOLECULES IN THE BIOLOGICAL UNIT: |
| MOLECULES | contact sites | |||||
| model | mark | query | asym_id oper (auth_asym_id) |
type | description | a(query A) |
| 1 | a | A(HLAE_HUMAN) | C 1 (A) | polymer(polypeptide(L)) [274 aa] | HLA class I histocompatibility antigen, A-11 alpha chain :1A11_HUMAN | |
| 2 | b | E 1 (C) | polymer(polypeptide(L)) [9 aa] | peptide from Virion membrane protein A14 :A14_VACCW | 26L(M) 28Y 30H(Y) 66M 80Y 83R(Q) 84E 87S(N) 88A(V) 90D(A) 91T(Q) 94I(T) 98N(D) 101T 105Y 118W(I) 120H(Y) 135E(R) 137F(D) 164S(T) 167K 168S(W) 171A 173E(A) 176H(Q) 177Q 180Y 184T(R) 188W 192Y (identity: 40.0 %/79.6 %) | |
| ALIGNMENTS |
| MODEL[1] Protein A "queryA" TEMPLATE:4n8v_C_1 identity=79.6% |
queryA 22:GSHSLKYFHTSVSRPGRGEPRFISVGYVDDTQFVRFDNDAASPRMVPRAPWMEQEGSEYWDRETRSARDTAQIFRVNLRTLRGYYNQSEAGSHTLQWMHG: 121
:**** ** ************** ************* **** ** ***** **** **** *** * ** * ********** **** * * *:
4n8v_C_1 1:GSHSMRYFYTSVSRPGRGEPRFIAVGYVDDTQFVRFDSDAASQRMEPRAPWIEQEGPEYWDQETRNVKAQSQTDRVDLGTLRGYYNQSEDGSHTIQIMYG: 100
SecStr : EEEEEEEEEE TTSSS EEEEEEEETTEEEEEEETTSSS S EE SGGGTTS HHHHHHHHHHHHHHHHHHHHHHHHHHHHTT TTS EEEEEEE:
ExpBur :eebbbebebebebeeeeeeeebebbbebbeeebbbbbeebeeeebeeebebbeebeeebbeebbeebeebbeebeeebeebeeeeeeeeeeebebebebb:
Contact : b b b b b bb bb bb b b b b b b
queryA 122:CELGPDGRFLRGYEQFAYDGKDYLTLNEDLRSWTAVDTAAQISEQKSNDASEAEHQRAYLEDTCVEWLHKYLEKGKETLLHLEPPKTHVTHHPISDHEAT: 221
:* ********** * ******* ********** * **** * * ** ****** ***** *** ***** ***** ***********:
4n8v_C_1 101:CDVGPDGRFLRGYRQDAYDGKDYIALNEDLRSWTAADMAAQITKRKWEAAHAAEQQRAYLEGRCVEWLRRYLENGKETLQRTDPPKTHMTHHPISDHEAT: 200
SecStr :EEE TTS EEEEEEEEEETTEEEEEE TTSS EEESSHHHHHHHHHHHHTTHHHHHHHHHHTHHHHHHHHHHHHTHHHHT B EEEEEEEESSSSEEE:
ExpBur :bbbbeeeeeeebbbebbbeeeebbebeeebeebeeeeebbeebeeeeeeeebbeebbebbebebbeebeebbeebeeebeeeeebeeebeeeeeeeeebb:
Contact : b b b bb b b bb b b b b
queryA 222:LRCWALGFYPAEITLTWQQDGEGHTQDTELVETRPAGDGTFQKWAAVVVPSGEEQRYTCHVQHEGLPEPVTLRW: 295
:****************** *** ******************************************* * ****:
4n8v_C_1 201:LRCWALGFYPAEITLTWQRDGEDQTQDTELVETRPAGDGTFQKWAAVVVPSGEEQRYTCHVQHEGLPKPLTLRW: 274
SecStr :EEEEEEEEBSS EEEEEETTEE TTEEE EE SSS EEEEEEEEEETT GGGEEEEEE TTSSS EEE :
ExpBur :bebebbebbbbebebebeeeeeebeeeeeeeeeeeeeeebbebbbbbebeeeebeebbbbbebebbeeeeebee:
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[assembly_id:1]
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