Protein Model on 4n8v_C_1_D_1 (TEMPLATE: 4n8v )

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ALL MOLECULES IN THE BIOLOGICAL UNIT:
[assembly_id:1]

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MOLECULES contact sites
model mark query asym_id oper
(auth_asym_id)
type description a(query A)
1 a A(HLAE_HUMAN) C 1 (A) polymer(polypeptide(L)) [274 aa] HLA class I histocompatibility antigen, A-11 alpha chain :1A11_HUMAN
2 b D 1 (B) polymer(polypeptide(L)) [100 aa] Beta-2-microglobulin :B2MG_HUMAN 29F 30H(Y) 31T 33V 44I 46V 48Y 53Q 56R 69R 115T 117Q 118W(I) 119M 136Q 137F(D) 138A 140D 141G 142K 143D 211T 213H 223R 225W 227L 252V 253E 255R 256P 257A 258G 259D 263Q (identity: 91.2 %/79.6 %)
ALIGNMENTS
MODEL[1] Protein A "queryA" TEMPLATE:4n8v_C_1 identity=79.6%
queryA        22:GSHSLKYFHTSVSRPGRGEPRFISVGYVDDTQFVRFDNDAASPRMVPRAPWMEQEGSEYWDRETRSARDTAQIFRVNLRTLRGYYNQSEAGSHTLQWMHG: 121
                :****  ** ************** ************* **** ** ***** **** **** ***      *  ** * ********** **** * * *:
4n8v_C_1       1:GSHSMRYFYTSVSRPGRGEPRFIAVGYVDDTQFVRFDSDAASQRMEPRAPWIEQEGPEYWDQETRNVKAQSQTDRVDLGTLRGYYNQSEDGSHTIQIMYG: 100
SecStr          :  EEEEEEEEEE  TTSSS EEEEEEEETTEEEEEEETTSSS S EE SGGGTTS HHHHHHHHHHHHHHHHHHHHHHHHHHHHTT  TTS  EEEEEEE:    
ExpBur          :eebbbebebebebeeeeeeeebebbbebbeeebbbbbeebeeeebeeebebbeebeeebbeebbeebeebbeebeeebeebeeeeeeeeeeebebebebb:    
Contact         :       bbb b          b b b    b  b            b                                             b bbb  

queryA       122:CELGPDGRFLRGYEQFAYDGKDYLTLNEDLRSWTAVDTAAQISEQKSNDASEAEHQRAYLEDTCVEWLHKYLEKGKETLLHLEPPKTHVTHHPISDHEAT: 221
                :*  ********** * *******  ********** * ****   *   *  ** ******  *****  *** *****    ***** ***********:
4n8v_C_1     101:CDVGPDGRFLRGYRQDAYDGKDYIALNEDLRSWTAADMAAQITKRKWEAAHAAEQQRAYLEGRCVEWLRRYLENGKETLQRTDPPKTHMTHHPISDHEAT: 200
SecStr          :EEE TTS EEEEEEEEEETTEEEEEE TTSS EEESSHHHHHHHHHHHHTTHHHHHHHHHHTHHHHHHHHHHHHTHHHHT  B  EEEEEEEESSSSEEE:    
ExpBur          :bbbbeeeeeeebbbebbbeeeebbebeeebeebeeeeebbeebeeeeeeeebbeebbebbebebbeebeebbeebeeebeeeeebeeebeeeeeeeeebb:    
Contact         :              bbb bbbb                                                                   b b        

queryA       222:LRCWALGFYPAEITLTWQQDGEGHTQDTELVETRPAGDGTFQKWAAVVVPSGEEQRYTCHVQHEGLPEPVTLRW: 295
                :****************** ***  ******************************************* * ****:
4n8v_C_1     201:LRCWALGFYPAEITLTWQRDGEDQTQDTELVETRPAGDGTFQKWAAVVVPSGEEQRYTCHVQHEGLPKPLTLRW: 274
SecStr          :EEEEEEEEBSS  EEEEEETTEE  TTEEE   EE SSS EEEEEEEEEETT GGGEEEEEE TTSSS EEE  :    
ExpBur          :bebebbebbbbebebebeeeeeebeeeeeeeeeeeeeeebbebbbbbebeeeebeebbbbbebebbeeeeebee:    
Contact         : b b b                        bb bbbbb   b                                                          


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