Protein Model on 8wte_C_1_A_1 (TEMPLATE: 8wte )

CurrentView:HTML5 Change to:[JAVA] DOWNLOAD:
[sequence-replaced 3D model] [for PyMOL]
[3D template]
[Modeller script]

ALL MOLECULES IN THE BIOLOGICAL UNIT:
[assembly_id:1]

Window size :
[small] [medium] [large]

[help]


MOLECULES contact sites
model mark query asym_id oper
(auth_asym_id)
type description a(query A)
1 a A(HLAE_HUMAN) C 1 (H) polymer(polypeptide(L)) [274 aa] MHC class I antigen (Fragment)
2 b A 1 (A) polymer(polypeptide(L)) [183 aa] T-cell receptor alpha chain 86R 87S(N) 90D(A) 172S(H) 175E 176H(Q) 178R 179A 180Y 184T(R) 187E (identity: 54.5 %/79.6 %)
ALIGNMENTS
MODEL[1] Protein A "queryA" TEMPLATE:8wte_C_1 identity=79.6%
queryA        22:GSHSLKYFHTSVSRPGRGEPRFISVGYVDDTQFVRFDNDAASPRMVPRAPWMEQEGSEYWDRETRSARDTAQIFRVNLRTLRGYYNQSEAGSHTLQWMHG: 121
                :****  ** ************** ************* **** ** ***** **** **** ***      *  ** * ********** **** * * *:
8wte_C_1       1:GSHSMRYFYTSVSRPGRGEPRFIAVGYVDDTQFVRFDSDAASQRMEPRAPWIEQEGPEYWDQETRNVKAQSQTDRVDLGTLRGYYNQSEDGSHTIQIMYG: 100
SecStr          :  EEEEEEEEEE  TTSSS EEEEEEEETTEEEEEEETTSSS S EE SGGGGGS HHHHHHHHHHHHHHHHHHHHHHHHHHHHTT  TTS  EEEEEEE:    
ExpBur          :eebbbebebebebeeeeeebebebbbebbeeebbebbbebeeeebbeebebbeebeeebbeebbeebeeebeebeeebeebeeeeeeeeeeebebebebb:    
Contact         :                                                                bb  b                               

queryA       122:CELGPDGRFLRGYEQFAYDGKDYLTLNEDLRSWTAVDTAAQISEQKSNDASEAEHQRAYLEDTCVEWLHKYLEKGKETLLHLEPPKTHVTHHPISDHEAT: 221
                :*  ********** * *******  ********** * ****   *   *  ** ******  *****  *** *****    ***** ***********:
8wte_C_1     101:CDVGPDGRFLRGYRQDAYDGKDYIALNEDLRSWTAADMAAQITKRKWEAAHAAEQQRAYLEGRCVEWLRRYLENGKETLQRTDPPKTHMTHHPISDHEAT: 200
SecStr          :EEE TTS EEEEEEEEEETTEEEEEE TTSS EEE SHHHHHHHHHHHHTTHHHHHHHHHHTHHHHHHHHHHHHTHHHHT  B  EEEEEEEE SSSEEE:    
ExpBur          :bbbbeebeeeebbbebbbeeeebbbbeeebeebebeeebbeebeeeeeeeebbeebeeebeeebbeebeebbeebeeebeeeeebeeebbeeeeeeeebb:    
Contact         :                                                  b  bb bbb   b  b                                  

queryA       222:LRCWALGFYPAEITLTWQQDGEGHTQDTELVETRPAGDGTFQKWAAVVVPSGEEQRYTCHVQHEGLPEPVTLRW: 295
                :****************** ***  ******************************************* * ****:
8wte_C_1     201:LRCWALGFYPAEITLTWQRDGEDQTQDTELVETRPAGDGTFQKWAAVVVPSGEEQRYTCHVQHEGLPKPLTLRW: 274
SecStr          :EEEEEEEEBSS  EEEEEETTEEE TTEEE   EE SSS EEEEEEEEEETT GGGEEEEEE TT SS EEEE :    
ExpBur          :bbbbbeebbbbebebebbeeeeebeeeeeeeeeeeeeeebbebbbbbebeeeebeebbbbbebeebeeeeebee:    


Input Residue Numbers for Focused Sites

ex) 2,15,123