[pdbjlvh2]Protein Model on 7dzm_A

Protein Model on 7dzm_A_1 (TEMPLATE: 7dzm )

CurrentView:HTML5 Change to:[JAVA]

DOWNLOAD:

[sequence-replaced 3D model] [for PyMOL]

[3D template]

[Modeller script]

ALL MOLECULES IN THE BIOLOGICAL UNIT:
[assembly_id:1]

Window size :
[small] [medium] [large]

[help]

MOLECULES						contact sites
model	mark	query	asym_id oper (auth_asym_id)	type	description
1	a	A(HLAE_HUMAN)	A 1 (A)	polymer(polypeptide(L)) [278 aa]	MHC class I antigen :I3ZN85_HUMAN

ALIGNMENTS

MODEL[1] Protein A "queryA" TEMPLATE:7dzm_A_1 identity=78.1%

queryA        21:AGSHSLKYFHTSVSRPGRGEPRFISVGYVDDTQFVRFDNDAASPRMVPRAPWMEQEGSEYWDRETRSARDTAQIFRVNLRTLRGYYNQSEAGSHTLQWMH: 120
                : ****  ** **************************** ******  ***** **** ***** *      **  *  ** **************** * :
7dzm_A_1       1:GGSHSMRYFYTSVSRPGRGEPRFISVGYVDDTQFVRFDSDAASPREEPRAPWIEQEGPEYWDRNTQIYKAQAQTDRESLRNLRGYYNQSEAGSHTLQSMY: 100
SecStr          :   EEEEEEEEEE  TTSSS EEEEEEEETTEEEEEEETTSSS   EE SGGGTTS HHHHHHHHHHHHHHHHHHHHHHHHHHHHHT  TTS  EEEEEE:    
ExpBur          :eeebbbbbebebebeeeeeebebebebebeebebbebeeeeeebebeeebebbeebeeebbeebbeebeeebeebeeebeebbeeeeeeeeeebebebeb:    

queryA       121:GCELGPDGRFLRGYEQFAYDGKDYLTLNEDLRSWTAVDTAAQISEQKSNDASEAEHQRAYLEDTCVEWLHKYLEKGKETLLHLEPPKTHVTHHPISDHEA: 220
                :**  ***** ***  * *******  ********** *******  *   *  **  *****  *****  *** **  *    ****************:
7dzm_A_1     101:GCDVGPDGRLLRGHNQYAYDGKDYIALNEDLRSWTAADTAAQISQRKLEAARVAEQLRAYLEGECVEWLRRYLENGKDKLERADPPKTHVTHHPISDHEA: 200
SecStr          :EEEE TTS EEEEEEEEEETTEEEEEE TTSS EEESSHHHHHHHHHHHHTTHHHHHHHHHHTHHHHHHHHHHHHTHHHHH  B  EEEEEEEE SSS E:    
ExpBur          :bbebbeebeeeebbbeebbeeeebbebeeebeebeeeeebbeebbeebeeeebbeebeeebeeebbeebeebbeebeeebebeeebeeebeeeeeeeeeb:    

queryA       221:TLRCWALGFYPAEITLTWQQDGEGHTQDTELVETRPAGDGTFQKWAAVVVPSGEEQRYTCHVQHEGLPEPVTLRWKPA: 298
                :******************* ***  ************** ***** ********************** * **** * :
7dzm_A_1     201:TLRCWALGFYPAEITLTWQRDGEDQTQDTELVETRPAGDRTFQKWTAVVVPSGEEQRYTCHVQHEGLPKPLTLRWEPS: 278
SecStr          :EEEEEEEEEBSS  EEEEEETTEEE SSEEE   EE SSS EEEEEEEEE SS GGGEEEEEE TTSSS EEE     :    
ExpBur          :bbbbbbeebbbbebebebeeeeeebeeeeeeeeeeeeeeebbebbbbbebeeeebeebbbbbebeebeeeeebeeeee:

Protein Model on 7dzm_A_1 (TEMPLATE: 7dzm )

Input Residue Numbers for Focused Sites