[pdbjlvh2]Protein Model on 1qqd_A

Protein Model on 1qqd_A_1 (TEMPLATE: 1qqd )

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ALL MOLECULES IN THE BIOLOGICAL UNIT:
[assembly_id:1]

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MOLECULES						contact sites
model	mark	query	asym_id oper (auth_asym_id)	type	description
1	a	A(HLAE_HUMAN)	A 1 (A)	polymer(polypeptide(L)) [273 aa]	HISTOCOMPATIBILITY LEUKOCYTE ANTIGEN (HLA)-CW4 (HEAVY CHAIN) :1C04_HUMAN

ALIGNMENTS

MODEL[1] Protein A "queryA" TEMPLATE:1qqd_A_1 identity=81.3%

queryA        23:SHSLKYFHTSVSRPGRGEPRFISVGYVDDTQFVRFDNDAASPRMVPRAPWMEQEGSEYWDRETRSARDTAQIFRVNLRTLRGYYNQSEAGSHTLQWMHGC: 122
                :***  ** **** ********* ************* ******  ** ** **** *******      **  ***** ********* ****** * **:
1qqd_A_1       1:SHSMRYFSTSVSWPGRGEPRFIAVGYVDDTQFVRFDSDAASPRGEPREPWVEQEGPEYWDRETQKYKRQAQADRVNLRKLRGYYNQSEDGSHTLQRMFGC: 100
SecStr          : EEEEEEEEEEE TT SS EEEEEEEETTEEEEEEESSSSS   EESSHHHHTS HHHHHHHHHHHHHHHHHHHHHHHHHHHHTT  SSS EEEEEEEEE:    
ExpBur          :eebbebebebbbeeeeeebebebebebeebebbebebeeeeeebeeeeebbeebeeebbeebbeebeeebeebeeebeebbeeeeeeeeeebebebbbbb:    

queryA       123:ELGPDGRFLRGYEQFAYDGKDYLTLNEDLRSWTAVDTAAQISEQKSNDASEAEHQRAYLEDTCVEWLHKYLEKGKETLLHLEPPKTHVTHHPISDHEATL: 222
                : ****** **** *********  ********** ******   *   * ***  ***** ******  *** *****   * ********* *******:
1qqd_A_1     101:DLGPDGRLLRGYNQFAYDGKDYIALNEDLRSWTAADTAAQITQRKWEAAREAEQRRAYLEGTCVEWLRRYLENGKETLQRAEHPKTHVTHHPVSDHEATL: 200
SecStr          :EE SSSSEEEEEEEEEETTEEEEEE TTSS EEESSHHHHHHHHHHHHTTHHHHHHHHHHTHHHHHHHHHHHHTHHHHT     EEEEEEEE SSS EEE:    
ExpBur          :ebeeeeeeeebbbebbbeeeebbebeeebeebeeeeebbeebbeeeeeeebbeeeeeebeeebbeebeebbeebeeebeeeeebeeebeeeeeeeeebbb:    

queryA       223:RCWALGFYPAEITLTWQQDGEGHTQDTELVETRPAGDGTFQKWAAVVVPSGEEQRYTCHVQHEGLPEPVTLRW: 295
                :***************** ***  ********************************************* ****:
1qqd_A_1     201:RCWALGFYPAEITLTWQWDGEDQTQDTELVETRPAGDGTFQKWAAVVVPSGEEQRYTCHVQHEGLPEPLTLRW: 273
SecStr          :EEEEEEESSS  EEEEEETTEE GGG EE   EE SSS EEEEEEEEE TT GGGEEEEEE TT SS EEE  :    
ExpBur          :bbebeebbbbebebbbeeeeeebeeeeeebeeeeeeeebbebbbbbebeeeebeebbbebebebbeeeeebee:

Protein Model on 1qqd_A_1 (TEMPLATE: 1qqd )

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