CurrentView:HTML5 Change to:[JAVA] |
DOWNLOAD: [sequence-replaced 3D model] [for PyMOL] [3D template] [Modeller script]
ALL MOLECULES IN THE BIOLOGICAL UNIT: |
MOLECULES | contact sites | |||||
model | mark | query | asym_id oper (auth_asym_id) |
type | description | a(query A) |
1 | a | A(HLAE_HUMAN) | A 1 (A) | polymer(polypeptide(L)) [276 aa] | HLA class I histocompatibility antigen, B-7 alpha chain :1B07_HUMAN | |
2 | b | E 1 (E) | polymer(polypeptide(L)) [9 aa] | SPI peptide from Influenza A virus | 28Y 30H(Y) 80Y 83R 84E(N) 87S(I) 88A(Y) 90D(A) 91T(Q) 94I(T) 97V(E) 98N(S) 101T(N) 102L 105Y 116L 120H(Y) 137F(Y) 144Y 164S(T) 167K 168S(W) 171A 173E 176H(Q) 177Q(R) 180Y 188W 192Y (identity: 44.8 %/79.0 %) |
ALIGNMENTS |
MODEL[1] Protein A "queryA" TEMPLATE:5wmn_A_1 identity=79.0% |
queryA 22:GSHSLKYFHTSVSRPGRGEPRFISVGYVDDTQFVRFDNDAASPRMVPRAPWMEQEGSEYWDRETRSARDTAQIFRVNLRTLRGYYNQSEAGSHTLQWMHG: 121 :**** ** **************************** ****** ***** **** ***** * ** * ** **************** * *: 5wmn_A_1 1:GSHSMRYFYTSVSRPGRGEPRFISVGYVDDTQFVRFDSDAASPREEPRAPWIEQEGPEYWDRNTQIYKAQAQTDRESLRNLRGYYNQSEAGSHTLQSMYG: 100 SecStr : EEEEEEEEEE TTSSS EEEEEEEETTEEEEEEETTSSS EE SGGGTT HHHHHHHHHHHHHHHHHHHHHHHHHHHHTT SSS EEEEEEE: ExpBur :eebbbbbebebebeeeeeebebebebebbebebbebeeeeeeeebbeebebbeebeeebbeebbeebeeebeebeeebeebeeeeeeeeeeebebebebb: Contact : b b b bb bb bb b bb bb b b b queryA 122:CELGPDGRFLRGYEQFAYDGKDYLTLNEDLRSWTAVDTAAQISEQKSNDASEAEHQRAYLEDTCVEWLHKYLEKGKETLLHLEPPKTHVTHHPISDHEAT: 221 :* ***** *** * ******* ********** ****** * * *** ***** ***** *** ** * *****************: 5wmn_A_1 101:CDVGPDGRLLRGHDQYAYDGKDYIALNEDLRSWTAADTAAQITQRKWEAAREAEQRRAYLEGECVEWLRRYLENGKDKLERADPPKTHVTHHPISDHEAT: 200 SecStr :EEE TTS EEEEEEEEEETTEEEEEE TTSS EEESSHHHHHHHHHHHHTTHHHHHHHHHHTHHHHHHHHHHHHTHHHHS B EEEEEEEESSSSEEE: ExpBur :bebbeeeeeeebbbebbbeeeebbebeeebeebebeeebbeebbeebeeeeebeebbebbeeebbeebeebbeebeeebebeeebeeebbeeeeeeeebb: Contact : b b b bb b b bb b b b queryA 222:LRCWALGFYPAEITLTWQQDGEGHTQDTELVETRPAGDGTFQKWAAVVVPSGEEQRYTCHVQHEGLPEPVTLRWKP: 297 :****************** *** ************** **************************** * **** *: 5wmn_A_1 201:LRCWALGFYPAEITLTWQRDGEDQTQDTELVETRPAGDRTFQKWAAVVVPSGEEQRYTCHVQHEGLPKPLTLRWEP: 276 SecStr :EEEEEEEEBSS EEEEEETTEE GGG EE EE SSS EEEEEEEEEETT GGGEEEEEE TTSSS EEE : ExpBur :bbbbbeebbbbebebebeeeeeebeeebeeeeeeeeeeebbebbbbbebeeeebeebbbbbebeebeeeeebeeee: |