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DOWNLOAD: [sequence-replaced 3D model] [for PyMOL] [3D template] [Modeller script]
ALL MOLECULES IN THE BIOLOGICAL UNIT: |
MOLECULES | contact sites | |||||
model | mark | query | asym_id oper (auth_asym_id) |
type | description | a(query A) |
1 | a | A(HLAE_HUMAN) | A 1 (A) | polymer(polypeptide(L)) [276 aa] | MHC class I antigen :C5MK56_HUMAN | |
2 | b | E 1 (E) | polymer(polypeptide(L)) [242 aa] | SB47 TCR beta chain | 78S(P) 82D 83R 86R(Q) 87S(I) 89R(K) (identity: 33.3 %/76.8 %) |
ALIGNMENTS |
MODEL[1] Protein A "queryA" TEMPLATE:4jry_A_1 identity=76.8% |
queryA 22:GSHSLKYFHTSVSRPGRGEPRFISVGYVDDTQFVRFDNDAASPRMVPRAPWMEQEGSEYWDRETRSARDTAQIFRVNLRTLRGYYNQSEAGSHTLQWMHG: 121 :**** ** * *********** ************* ****** ***** **** ***** * * * ** ************* * * *: 4jry_A_1 1:GSHSMRYFYTAMSRPGRGEPRFIAVGYVDDTQFVRFDSDAASPRTEPRAPWIEQEGPEYWDRNTQIFKTNTQTYRESLRNLRGYYNQSEAGSHIIQRMYG: 100 SecStr : EEEEEEEEE TTS S EEEEEEEETTEEEEEEETTSSS EE SGGGTT HHHHHHHHHHHHHHHHHHHHHHHHHHHHTT SSS EEEEEEE: ExpBur :eeebbbbebebebbeeeeebebebebebbebebbebebeeeeeebeeebebbeebeeebbeebbeebeebbeebbeebeebeeeeeeeeeeebebebbbb: Contact : b bb bb b queryA 122:CELGPDGRFLRGYEQFAYDGKDYLTLNEDLRSWTAVDTAAQISEQKSNDASEAEHQRAYLEDTCVEWLHKYLEKGKETLLHLEPPKTHVTHHPISDHEAT: 221 :* ****** *** * ******* ***** **** ****** * * ** ***** ***** *** ***** ********** ******: 4jry_A_1 101:CDLGPDGRLLRGHDQSAYDGKDYIALNEDLSSWTAADTAAQITQRKWEAARVAEQRRAYLEGLCVEWLRRYLENGKETLQRADPPKTHVTHHPVSDHEAT: 200 SecStr :EEE GGG EEEEEEEEEETTEEEEEE SSTT EEESSHHHHHHHHHHHHTTHHHHHHHHHHTHHHHHHHHHHHHTHHHHSS B EEEEEEEE SSSEEE: ExpBur :bbbbeebebeebebebbbeeeebbebeeebeebebeeebbeebbeeeeeeebbeeeeeebeeebbeebeebbeebeeebeeeeebeeebeeeeeeeeebb: queryA 222:LRCWALGFYPAEITLTWQQDGEGHTQDTELVETRPAGDGTFQKWAAVVVPSGEEQRYTCHVQHEGLPEPVTLRWKP: 297 :****************** *** ************** **************************** * **** *: 4jry_A_1 201:LRCWALGFYPAEITLTWQRDGEDQTQDTELVETRPAGDRTFQKWAAVVVPSGEEQRYTCHVQHEGLPKPLTLRWEP: 276 SecStr :EEEEEEEEBSS EEEEESSSSB TTT EE EE SSS EEEEEEEEEETT GGG EEEEE TT SS EEE : ExpBur :bbbbbeebbbbebebbbbeeeeebeeebeeeeeeeeeeebbebbbbbebeeeebeebbbbbebeebeeeeebebee: |