[pdbjlvh2]Protein Model on 3kyo_A_1_E

Protein Model on 3kyo_A_1_E_1 (TEMPLATE: 3kyo )

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ALL MOLECULES IN THE BIOLOGICAL UNIT:
[assembly_id:1]

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MOLECULES						contact sites
model	mark	query	asym_id oper (auth_asym_id)	type	description	a(query A)
1	a	A(HLAE_HUMAN)	A 1 (A)	polymer(polypeptide(L)) [273 aa]	MHC class I antigen :Q9MYA2_HUMAN
2	b		E 1 (P)	polymer(polypeptide(L)) [9 aa]	KLPAQFYIL peptide	26L(M) 28Y 66M 83R(E) 84E 87S(N) 88A(T) 91T(H) 94I(T) 98N 101T 105Y 118W 120H(I) 137F(Y) 164S 167K 173E(V) 176H(Q) 177Q(R) 180Y 188W 192Y (identity: 52.2 %/78.0 %)

ALIGNMENTS

MODEL[1] Protein A "queryA" TEMPLATE:3kyo_A_1 identity=78.0%

queryA        23:SHSLKYFHTSVSRPGRGEPRFISVGYVDDTQFVRFDNDAASPRMVPRAPWMEQEGSEYWDRETRSARDTAQIFRVNLRTLRGYYNQSEAGSHTLQWMHGC: 122
                :***  **   ************  ************ * ***** ***** **** ***  ***     **  * ** *********** ******* **:
3kyo_A_1       1:SHSMRYFSAAVSRPGRGEPRFIAMGYVDDTQFVRFDSDSASPRMEPRAPWVEQEGPEYWEEETRNTKAHAQTDRMNLQTLRGYYNQSEASSHTLQWMIGC: 100
SecStr          : EEEEEEEEEE  TTSSS EEEEEEEETTEEEEEEETTSSS   EE SGGGTTS HHHHHHHHHHHHHHHHHHHHHHHHHHHHTT  TTS  EEEEEEEE:    
ExpBur          :eebbbbebbbebeeeeeebebbbbbebbebebbbbbbeeeeeebeeebebbeebeeebbeebbeebeebbeebbeebeebeeeeeeeeeeebebebbbbb:    
Contact         :   b b                                     b                bb  bb  b  b   b  b   b            b b  

queryA       123:ELGPDGRFLRGYEQFAYDGKDYLTLNEDLRSWTAVDTAAQISEQKSNDASEAEHQRAYLEDTCVEWLHKYLEKGKETLLHLEPPKTHVTHHPISDHEATL: 222
                : ** ***  ****  ******** ********** *******  *   *  **  ***** ******* *** *** *    **********  * ****:
3kyo_A_1     101:DLGSDGRLIRGYERYAYDGKDYLALNEDLRSWTAADTAAQISKRKCEAANVAEQRRAYLEGTCVEWLHRYLENGKEMLQRADPPKTHVTHHPVFDYEATL: 200
SecStr          :EESSSSS SEEEEEEEETTEEEEEE TTSS EEESSHHHHHHHHHHHHTTHHHHHHHHHHTHHHHHHHHHHHHTHHHHS  B  EEEEEEEEETTTEEEE:    
ExpBur          :bbeeeeeeeebbbeebbeeeebbbbeeebeebeeeeebbeebbeebeeeebbeeebeebeeebbeebeebbeebeeebeeeeebeeebeeeeeeeeebbb:    
Contact         :              b                          b  b     b  bb  b       b   b                              

queryA       223:RCWALGFYPAEITLTWQQDGEGHTQDTELVETRPAGDGTFQKWAAVVVPSGEEQRYTCHVQHEGLPEPVTLRW: 295
                :************ **** ***  *** *****************************************  ***:
3kyo_A_1     201:RCWALGFYPAEIILTWQRDGEDQTQDVELVETRPAGDGTFQKWAAVVVPSGEEQRYTCHVQHEGLPEPLMLRW: 273
SecStr          :EEEEEEEBSS  EEEEEETTEEE TT EE   EE SSS EEEEEEEEEETT GGGEEEEEE TTSSS EEE  :    
ExpBur          :bbbbeebbbbebebbbbeeeeeeeeeeeeeeeeeeeeebbebbbbbebeeeebeebbbbbebeebeeeeebee:

Protein Model on 3kyo_A_1_E_1 (TEMPLATE: 3kyo )

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