[pdbjlvh2]Protein Model on 3am8_A_1_E

Protein Model on 3am8_A_1_E_1 (TEMPLATE: 3am8 )

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ALL MOLECULES IN THE BIOLOGICAL UNIT:
[assembly_id:1]

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MOLECULES						contact sites
model	mark	query	asym_id oper (auth_asym_id)	type	description	a(query A)
1	a	A(HLAE_HUMAN)	A 1 (A)	polymer(polypeptide(L)) [276 aa]	HLA class I histocompatibility antigen, alpha chain E :HLAE_HUMAN
2	b		E 1 (E)	polymer(polypeptide(L)) [9 aa]	Peptide from Glycoprotein :Q0QI92_HCMV	28Y 30H 66M 80Y 83R 84E 87S 88A 91T 94I 95F 98N 101T 105Y 118W 137F 145L 154W 164S 167K 168S 173E 176H 177Q 180Y 184T 188W 192Y (identity: 100.0 %/99.6 %)

ALIGNMENTS

MODEL[1] Protein A "queryA" TEMPLATE:3am8_A_1 identity=99.6%

queryA        22:GSHSLKYFHTSVSRPGRGEPRFISVGYVDDTQFVRFDNDAASPRMVPRAPWMEQEGSEYWDRETRSARDTAQIFRVNLRTLRGYYNQSEAGSHTLQWMHG: 121
                :****************************************************************************************************:
3am8_A_1       1:GSHSLKYFHTSVSRPGRGEPRFISVGYVDDTQFVRFDNDAASPRMVPRAPWMEQEGSEYWDRETRSARDTAQIFRVNLRTLRGYYNQSEAGSHTLQWMHG: 100
SecStr          :  EEEEEEEEEE  SSSSS EEEEEEEETTEEEEEEETTSSS  EEE SGGGTT  HHHHHHHHHHHHHHHHHHHHHHHHHHHHTT  TTS  EEEEEEE:    
ExpBur          :eebbbebebebebeeeeeebebebbbebbebebbebeeeeeebebeeebebbeebeeebbeebbeebeeebeebeeebeebeeeeeeeeeeebebebebb:    
Contact         :      b b                                   b             b  bb  bb  b  bb  b  b   b            b   

queryA       122:CELGPDGRFLRGYEQFAYDGKDYLTLNEDLRSWTAVDTAAQISEQKSNDASEAEHQRAYLEDTCVEWLHKYLEKGKETLLHLEPPKTHVTHHPISDHEAT: 221
                :****** *********************************************************************************************:
3am8_A_1     101:CELGPDRRFLRGYEQFAYDGKDYLTLNEDLRSWTAVDTAAQISEQKSNDASEAEHQRAYLEDTCVEWLHKYLEKGKETLLHLEPPKTHVTHHPISDHEAT: 200
SecStr          :EEE TTSSEEEEEEEEEETTEEEEEE TTSS EEESSGGGHHHHHHHHHTTHHHHHHHHHHTHHHHHHHHHHHHTHHHHT  B  EEEEEEEESSSSEEE:    
ExpBur          :bebbeeeeeeebbbebbbeeeebbbbeeebeebebebeebeebeeeeeeeeebeebeeebeeebbeebeebbeebeeebeeeeebeeebeeeeeeeeebb:    
Contact         :               b       b        b         b  bb    b  bb  b   b   b   b                             

queryA       222:LRCWALGFYPAEITLTWQQDGEGHTQDTELVETRPAGDGTFQKWAAVVVPSGEEQRYTCHVQHEGLPEPVTLRWKP: 297
                :****************************************************************************:
3am8_A_1     201:LRCWALGFYPAEITLTWQQDGEGHTQDTELVETRPAGDGTFQKWAAVVVPSGEEQRYTCHVQHEGLPEPVTLRWKP: 276
SecStr          :EEEEEEEEBSS  EEEEEETTB   TT EE   EE SSS EEEEEEEEEETT GGGEEEEEE TT SS EEE    :    
ExpBur          :bbbebeebbbbebebebeeeeeebeeebeebeeeeeeeebbebbbbbebeeeebeebbbebebebbeeeeebeeee:

Protein Model on 3am8_A_1_E_1 (TEMPLATE: 3am8 )

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