[pdbjlvh2]Protein Model on 7duu_A_1_D

Protein Model on 7duu_A_1_D_1 (TEMPLATE: 7duu )

CurrentView:HTML5 Change to:[JAVA]

DOWNLOAD:

[sequence-replaced 3D model] [for PyMOL]

[3D template]

[Modeller script]

ALL MOLECULES IN THE BIOLOGICAL UNIT:
[assembly_id:1]

Window size :
[small] [medium] [large]

[help]

MOLECULES						contact sites
model	mark	query	asym_id oper (auth_asym_id)	type	description	a(query A)
1	a	A(HLAE_HUMAN)	A 1 (A)	polymer(polypeptide(L)) [273 aa]	MHC class I antigen :F6IQA6_HUMAN
2	b		D 1 (D)	polymer(polypeptide(L)) [196 aa]	Killer cell immunoglobulin-like receptor 2DS2 :KI2S2_HUMAN	90D(R) 97V 100R 105Y 163I 166Q(R) 167K 170D(A) 171A 172S(R) (identity: 60.0 %/82.4 %)

ALIGNMENTS

MODEL[1] Protein A "queryA" TEMPLATE:7duu_A_1 identity=82.4%

queryA        23:SHSLKYFHTSVSRPGRGEPRFISVGYVDDTQFVRFDNDAASPRMVPRAPWMEQEGSEYWDRETRSARDTAQIFRVNLRTLRGYYNQSEAGSHTLQWMHGC: 122
                :*** *** **************************** ******  ***** **** *******      **  ** ** ****************** **:
7duu_A_1       1:SHSMKYFFTSVSRPGRGEPRFISVGYVDDTQFVRFDSDAASPRGEPRAPWVEQEGPEYWDRETQKYKRQAQTDRVSLRNLRGYYNQSEAGSHTLQWMCGC: 100
SecStr          :  EEEEEEEEE  TTS S EEEEEEEETTEEEEEEETTSSS   EE SGGGTTS HHHHHHHHHHHHHHHHHHHHHHHHHHHHTT  SSS  EEEEEEEE:    
ExpBur          :eebbebebebebbeeeeebebebebebbeeebbebbeeeeeeebeeebebbeebeeebbeebbeebeeebeebbeebeebbeeeeeeeeeebebebbbbb:    
Contact         :                                                                   b      b  b    b                 

queryA       123:ELGPDGRFLRGYEQFAYDGKDYLTLNEDLRSWTAVDTAAQISEQKSNDASEAEHQRAYLEDTCVEWLHKYLEKGKETLLHLEPPKTHVTHHPISDHEATL: 222
                : ****** **** * *******  ********** ******   *   * ***  ***** ******  *** *****   * ********* *******:
7duu_A_1     101:DLGPDGRLLRGYDQYAYDGKDYIALNEDLRSWTAADTAAQITQRKWEAAREAEQRRAYLEGTCVEWLRRYLENGKETLQRAEHPKTHVTHHPVSDHEATL: 200
SecStr          :E  SS S SEEEEEEEETTEEEEEE TTSS EEESSHHHHHHHHHHHHHTHHHHHHHHHHTHHHHHHHHHHHHTHHHHTS    EEEEEEEE SSSEEEE:    
ExpBur          :bbbeeeeeeebbbebbbeeeebbebeeebeebebeeebbeebeeeeeeeeebeebeeebebebbeebeebbeebeeebeeeeebeeebeeeeeeeeebbb:    
Contact         :                                        b  bb  bbb                                                  

queryA       223:RCWALGFYPAEITLTWQQDGEGHTQDTELVETRPAGDGTFQKWAAVVVPSGEEQRYTCHVQHEGLPEPVTLRW: 295
                :***************** ***  *********************** ********************* ****:
7duu_A_1     201:RCWALGFYPAEITLTWQWDGEDQTQDTELVETRPAGDGTFQKWAAVMVPSGEEQRYTCHVQHEGLPEPLTLRW: 273
SecStr          :EEEEEEESSS  EEEEEETTEE  TTEEE   EE SSS EEEEEEEEEETT GGGEEEEEE TT SS EEE  :    
ExpBur          :bbbbeebbbbebebbbbeeeeebeeeeeeeeeeeeeeebbebbbbbebeeeebeebbbebebeebeeeeebee:

Protein Model on 7duu_A_1_D_1 (TEMPLATE: 7duu )

Input Residue Numbers for Focused Sites