[pdbjlvh2]Protein Model on 6vmx_A_1_D

Protein Model on 6vmx_A_1_D_1 (TEMPLATE: 6vmx )

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ALL MOLECULES IN THE BIOLOGICAL UNIT:
[assembly_id:1]

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MOLECULES						contact sites
model	mark	query	asym_id oper (auth_asym_id)	type	description	a(query A)
1	a	A(HLAE_HUMAN)	A 1 (A)	polymer(polypeptide(L)) [276 aa]	HLA class I histocompatibility antigen, B-7 alpha chain :1B07_HUMAN
2	b		D 1 (D)	polymer(polypeptide(L)) [203 aa]	HD14 alpha chain	79E 83R 86R(Q) 172S(R) 175E 176H(Q) 178R 179A 184T(E) (identity: 55.6 %/79.0 %)

ALIGNMENTS

MODEL[1] Protein A "queryA" TEMPLATE:6vmx_A_1 identity=79.0%

queryA        22:GSHSLKYFHTSVSRPGRGEPRFISVGYVDDTQFVRFDNDAASPRMVPRAPWMEQEGSEYWDRETRSARDTAQIFRVNLRTLRGYYNQSEAGSHTLQWMHG: 121
                :****  ** **************************** ******  ***** **** ***** *      **  *  ** **************** * *:
6vmx_A_1       1:GSHSMRYFYTSVSRPGRGEPRFISVGYVDDTQFVRFDSDAASPREEPRAPWIEQEGPEYWDRNTQIYKAQAQTDRESLRNLRGYYNQSEAGSHTLQSMYG: 100
SecStr          :  EEEEEEEEEE  TTSSS EEEEEEEETTEEEEEEETTSSS   EE STTGGGS HHHHHHHHHHHHHHHHHHHHHHHHHHHHTT  TTS  EEEEEEE:    
ExpBur          :eebebbbebebebeeeeeebebebebebeebebbebbeeeeeeebeeebebbeebeeebbeebbeebeeebeebeeebeebbeeeeeeeeeebebebebb:    
Contact         :                                                         b   b  b                                   

queryA       122:CELGPDGRFLRGYEQFAYDGKDYLTLNEDLRSWTAVDTAAQISEQKSNDASEAEHQRAYLEDTCVEWLHKYLEKGKETLLHLEPPKTHVTHHPISDHEAT: 221
                :*  ***** ***  * *******  ********** ******   *   * ***  *****  *****  *** **  *    *****************:
6vmx_A_1     101:CDVGPDGRLLRGHDQYAYDGKDYIALNEDLRSWTAADTAAQITQRKWEAAREAEQRRAYLEGECVEWLRRYLENGKDKLERADPPKTHVTHHPISDHEAT: 200
SecStr          :EEE SSS EEEEEEEEEETTEEEEEE TTSS EEESSTTHHHHHHHHHHTTHHHHHHHHHHTHHHHHHHHHHHHTHHHHTS B  EEEEEEEE SSSEEE:    
ExpBur          :bbbbeeeeeeebbbebbbeeeebbebeeebeebeeeeebbeebbeebeeeebbeebeeebeeebbeebeebbebbeeebeeeeebeeebeeeeeeeeebb:    
Contact         :                                                  b  bb bb    b                                     

queryA       222:LRCWALGFYPAEITLTWQQDGEGHTQDTELVETRPAGDGTFQKWAAVVVPSGEEQRYTCHVQHEGLPEPVTLRWKP: 297
                :****************** ***  ************** **************************** * **** *:
6vmx_A_1     201:LRCWALGFYPAEITLTWQRDGEDQTQDTELVETRPAGDRTFQKWAAVVVPSGEEQRYTCHVQHEGLPKPLTLRWEP: 276
SecStr          :EEEEEEEEBSS  EEEEEESS B  SS EE   EE SSS EEEEEEEEEETT  TTEEEEEE TT SS EEE    :    
ExpBur          :bebebeebbbbebebebeeeeeebeeebeeeeeeeeeeebbebbbbbebeeeebeebbbebebeebeeeeeeeeee:

Protein Model on 6vmx_A_1_D_1 (TEMPLATE: 6vmx )

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