[pdbjlvh2]Protein Model on 5deg_A_1_D

Protein Model on 5deg_A_1_D_1 (TEMPLATE: 5deg )

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ALL MOLECULES IN THE BIOLOGICAL UNIT:
[assembly_id:1]

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MOLECULES						contact sites
model	mark	query	asym_id oper (auth_asym_id)	type	description	a(query A)
1	a	A(HLAE_HUMAN)	A 1 (A)	polymer(polypeptide(L)) [276 aa]	MHC class I antigen :Q7YQB0_HUMAN
2	b		D 1 (A)	non-polymer(GOL)	GLYCEROL	51D 232A(G) 262F (identity: 66.7 %/79.0 %)

ALIGNMENTS

MODEL[1] Protein A "queryA" TEMPLATE:5deg_A_1 identity=79.0%

queryA        22:GSHSLKYFHTSVSRPGRGEPRFISVGYVDDTQFVRFDNDAASPRMVPRAPWMEQEGSEYWDRETRSARDTAQIFRVNLRTLRGYYNQSEAGSHTLQWMHG: 121
                :****  ***************** ******* ***** ******  ***** **** *******      **  *  ****  ************* * *:
5deg_A_1       1:GSHSMRYFHTSVSRPGRGEPRFITVGYVDDTLFVRFDSDAASPREEPRAPWIEQEGPEYWDRETQICKAKAQTDRESLRTLLRYYNQSEAGSHTLQNMYG: 100
SecStr          :  EEEEEEEEEE  TTS S EEEEEEEETTEEEEEEETTSSS   EE SGGGTTS HHHHHHHHHHHHHHHHHHHHHHHHHHHHTT  TTS  EEEEEEE:    
ExpBur          :eebbbbbebebebbeeeeebebebebebbebebbebbeeeeeeebeeebebbeebeeebbeebbeebeebbeebeeebebbbeeeeeeeeeebebebbeb:    
Contact         :                             b                                                                      

queryA       122:CELGPDGRFLRGYEQFAYDGKDYLTLNEDLRSWTAVDTAAQISEQKSNDASEAEHQRAYLEDTCVEWLHKYLEKGKETLLHLEPPKTHVTHHPISDHEAT: 221
                :*  ***** **** * *******  ***** **** ******   *   * ***  *****  *****  *** *****    *****************:
5deg_A_1     101:CDVGPDGRLLRGYDQYAYDGKDYIALNEDLSSWTAADTAAQITQRKWEAAREAEQLRAYLEGECVEWLRRYLENGKETLQRADPPKTHVTHHPISDHEAT: 200
SecStr          :EEE TTS EEEEEEEEEETTEEEEEE TTSS EEESSHHHHHHHHHHHHTTHHHHHHHHHHTHHHHHHHHHHHHTHHHHT  B  EEEEEEEEEETTEEE:    
ExpBur          :bbbbeebeeeebbbebbbeeeebbebeeebeebebeeebbeebeeeeeeeeebeebeeebebebbeebeebbeebeebbeebbebeeebeeeeeeeeebb:    

queryA       222:LRCWALGFYPAEITLTWQQDGEGHTQDTELVETRPAGDGTFQKWAAVVVPSGEEQRYTCHVQHEGLPEPVTLRWKP: 297
                :********** ******* ***  ************** **************************** * **** *:
5deg_A_1     201:LRCWALGFYPGEITLTWQRDGEDQTQDTELVETRPAGDRTFQKWAAVVVPSGEEQRYTCHVQHEGLPKPLTLRWEP: 276
SecStr          :EEEEEEEEBSS  EEEEEETTEE GGG EE   EE SSS EEEEEEEEEETT GGGEEEEEE TT SS EEE    :    
ExpBur          :bbbbbebbbbbebebbbbeeeeebeeebeeeeeeeeeeebbebbbbbebeeeebeebbbbbebeebeeeeebeeee:    
Contact         :          b                             b

Protein Model on 5deg_A_1_D_1 (TEMPLATE: 5deg )

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