CurrentView:HTML5 Change to:[JAVA] |
DOWNLOAD: [sequence-replaced 3D model] [for PyMOL] [3D template] [Modeller script]
ALL MOLECULES IN THE BIOLOGICAL UNIT: |
MOLECULES | contact sites | |||||
model | mark | query | asym_id oper (auth_asym_id) |
type | description | a(query A) |
1 | a | A(HLAE_HUMAN) | A 1 (A) | polymer(polypeptide(L)) [273 aa] | MHC class I antigen (Fragment) :F6IQM2_HUMAN | |
2 | b | C 1 (C) | polymer(polypeptide(L)) [9 aa] | VAL-ARG-SER-ARG-ARG-ABA-LEU-ARG-LEU | 28Y 30H(D) 45S 80Y 83R 84E 87S(K) 88A(Y) 90D(R) 91T(Q) 94I(A) 95F(D) 98N 101T(K) 102L 105Y 118W 120H(Y) 164S(T) 167K 168S(W) 171A 172S(R) 173E 176H(Q) 177Q(W) 180Y 188W 192Y (identity: 51.7 %/82.1 %) |
ALIGNMENTS |
MODEL[1] Protein A "queryA" TEMPLATE:8shi_A_1 identity=82.1% |
queryA 23:SHSLKYFHTSVSRPGRGEPRFISVGYVDDTQFVRFDNDAASPRMVPRAPWMEQEGSEYWDRETRSARDTAQIFRVNLRTLRGYYNQSEAGSHTLQWMHGC: 122 :*** ** * ************************** ****** ***** **** ******* ** ***** ********* ******** **: 8shi_A_1 3:SHSMRYFDTAVSRPGRGEPRFISVGYVDDTQFVRFDSDAASPRGEPRAPWVEQEGPEYWDRETQKYKRQAQADRVNLRKLRGYYNQSEDGSHTLQWMYGC: 102 SecStr : EEEEEEEEE TTS S EEEEEEEETTEEEEEEETTSSS EE SHHHHTS HHHHHHHHHHHHHHHHHHHHHHHHHHHHHT TTS EEEEEEEE: ExpBur :eebbebebebebbeeeeebebebebebbeeebbebeeeeeeeebeeebebbeebeeebbeebbeebeeebeebeeebeebbeeeeeeeeeebebebbbbb: Contact : b b b b bb bb bb bb b bb b b b queryA 123:ELGPDGRFLRGYEQFAYDGKDYLTLNEDLRSWTAVDTAAQISEQKSNDASEAEHQRAYLEDTCVEWLHKYLEKGKETLLHLEPPKTHVTHHPISDHEATL: 222 : ****** **** * ******* ********** ****** * * *** ***** ****** *** ***** * ********* *******: 8shi_A_1 103:DLGPDGRLLRGYDQSAYDGKDYIALNEDLRSWTAADTAAQITQRKWEAAREAEQWRAYLEGTCVEWLRRYLENGKETLQRAEHPKTHVTHHPVSDHEATL: 202 SecStr :EE TTSSEEEEEEEEEETTEEEEEE TTSSSEEESSHHHHHHHHHHHHTTHHHHHHHHHHTHHHHHHHHHHHHTHHHHTS B B EEEE SSSSEEEE: ExpBur :bbbeebbeeebbbebbbeeeebbebeeebeebebeeebbeebbeeeeeeeebeebbeebeeebbeebeebbeebeeebeeeeebeeebeeeeeeeeebbb: Contact : b bb bbb bb b b b queryA 223:RCWALGFYPAEITLTWQQDGEGHTQDTELVETRPAGDGTFQKWAAVVVPSGEEQRYTCHVQHEGLPEPVTLRW: 295 :***************** *** ********************************************* ****: 8shi_A_1 203:RCWALGFYPAEITLTWQRDGEDQTQDTELVETRPAGDGTFQKWAAVVVPSGEEQRYTCHVQHEGLPEPLTLRW: 275 SecStr :EEEEEEEBSS EEEEEEESSSB SSEEE EE SSS EEEEEEEEEETT GGGEEEEEEETTSSS EEE : ExpBur :bbebebbbbbebebebeeeeeeeeeebeeeeeeeeeeebbebbbbbebeeeebeebbbbbebeebeeeeebee: |