Protein Model on 8dvg_A_1_C_1
(TEMPLATE: 
8dvg
)Protein Model on 8dvg_A_1_C_1
(TEMPLATE: 8dvg
)| CurrentView:HTML5 Change to:[JAVA] |
DOWNLOAD: [sequence-replaced 3D model]
[for PyMOL] [3D template] [Modeller script]
ALL MOLECULES IN THE BIOLOGICAL UNIT: |
| MOLECULES | contact sites | |||||
| model | mark | query | asym_id oper (auth_asym_id) |
type | description | a(query A) |
| 1 | a | A(HLAE_HUMAN) | A 1 (A) | polymer(polypeptide(L)) [277 aa] | HLA class I histocompatibility antigen, A-3 alpha chain :1A03_HUMAN | |
| 2 | b | C 1 (C) | polymer(polypeptide(L)) [10 aa] | VAL-VAL-VAL-GLY-ALA-GLY-GLY-VAL-GLY-LYS | 26L(M) 28Y 66M 80Y 84E 87S(N) 90D(A) 94I(T) 98N(D) 101T 102L 105Y 116L(I) 120H(Y) 137F(D) 144Y 164S(T) 167K 168S(W) 173E 180Y 188W 192Y (identity: 56.5 %/79.3 %) | |
| ALIGNMENTS |
| MODEL[1] Protein A "queryA" TEMPLATE:8dvg_A_1 identity=79.3% |
queryA 22:GSHSLKYFHTSVSRPGRGEPRFISVGYVDDTQFVRFDNDAASPRMVPRAPWMEQEGSEYWDRETRSARDTAQIFRVNLRTLRGYYNQSEAGSHTLQWMHG: 121
:**** ** ************** ************* **** ** ***** **** **** *** * ** * *************** * * *:
8dvg_A_1 4:GSHSMRYFFTSVSRPGRGEPRFIAVGYVDDTQFVRFDSDAASQRMEPRAPWIEQEGPEYWDQETRNVKAQSQTDRVDLGTLRGYYNQSEAGSHTIQIMYG: 103
SecStr : EEEEEEEEEE TTSSS EEEEEEEETTEEEEEEETTSSS S EE SGGGTTS HHHHHHHHHHHHHHHHHHHHHHHHHHHHTT SSS EEEEEEE:
ExpBur :eebbbebebebebbeeeeebebebbbebbebebbebbeebeeeebbeebebbeebeeebbeebbeebeebeeebeeebeebeeeeeeeeeeebebebbbb:
Contact : b b b b b b b b b bb b b b
queryA 122:CELGPDGRFLRGYEQFAYDGKDYLTLNEDLRSWTAVDTAAQISEQKSNDASEAEHQRAYLEDTCVEWLHKYLEKGKETLLHLEPPKTHVTHHPISDHEAT: 221
:* * ******** * ******* ********** * **** * * *** **** ****** *** ***** ***** ***********:
8dvg_A_1 104:CDVGSDGRFLRGYRQDAYDGKDYIALNEDLRSWTAADMAAQITKRKWEAAHEAEQLRAYLDGTCVEWLRRYLENGKETLQRTDPPKTHMTHHPISDHEAT: 203
SecStr :EEE TT EEEEEEEEEETTEEEEEE TTSS EEESSHHHHHHHHHHHHHTHHHHHHHHHTTHHHHHHHHHHHHTHHHHT B EEEEEEEESSSSEEE:
ExpBur :bbbbeebeeeebbbebbbeeeebbebeeebeebebeeebbeebbeebeeeeebeebeeebeeebbeebeebbeebeeebeeeeebeeebeeeeeeeeebb:
Contact : b b b bb b b b b
queryA 222:LRCWALGFYPAEITLTWQQDGEGHTQDTELVETRPAGDGTFQKWAAVVVPSGEEQRYTCHVQHEGLPEPVTLRWK: 296
:****************** *** ******************************************* * **** :
8dvg_A_1 204:LRCWALGFYPAEITLTWQRDGEDQTQDTELVETRPAGDGTFQKWAAVVVPSGEEQRYTCHVQHEGLPKPLTLRWE: 278
SecStr :EEEEEEEEBSS EEEEEETTEE GGGEEE EE SSS EEEEEEEEEETT GGGEEEEEE TT SS EEEE :
ExpBur :bbbbbeebbbbebebbbeeeeeeeeeeeeeeeeeeeeeebbebbbbbebeeeebeebbbebebeebeeeeebeee:
|
[assembly_id:1]
[help]