Protein Model on 7s8r_A_1_C_1 (TEMPLATE: 7s8r )

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ALL MOLECULES IN THE BIOLOGICAL UNIT:
[assembly_id:1]

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MOLECULES contact sites
model mark query asym_id oper
(auth_asym_id)
type description a(query A)
1 a A(HLAE_HUMAN) A 1 (A) polymer(polypeptide(L)) [275 aa] HLA class I histocompatibility antigen, A alpha chain :U5YJK1_HUMAN
2 b C 1 (C) polymer(polypeptide(L)) [9 aa] Matrix protein 1 peptide SALEWIKNK :M1_INBAC 26L(M) 28Y 30H(Y) 80Y 84E 87S(N) 90D(A) 91T(Q) 94I(T) 97V 98N(D) 101T 105Y 120H(Y) 135E(R) 137F(D) 164S(T) 167K 168S(W) 173E(A) 176H(Q) 177Q 180Y 184T(R) 188W 192Y (identity: 42.3 %/79.3 %)
ALIGNMENTS
MODEL[1] Protein A "queryA" TEMPLATE:7s8r_A_1 identity=79.3%
queryA        22:GSHSLKYFHTSVSRPGRGEPRFISVGYVDDTQFVRFDNDAASPRMVPRAPWMEQEGSEYWDRETRSARDTAQIFRVNLRTLRGYYNQSEAGSHTLQWMHG: 121
                :****  ** ************** ************* **** ** ***** **** **** ***      *  ** * ********** **** * * *:
7s8r_A_1       1:GSHSMRYFYTSVSRPGRGEPRFIAVGYVDDTQFVRFDSDAASQRMEPRAPWIEQEGPEYWDQETRNVKAQSQTDRVDLGTLRGYYNQSEDGSHTIQIMYG: 100
SecStr          :  EEEEEEEEEE  TTTSS EEEEEEEETTEEEEEEETT SS S EE STTTTTS HHHHHHHHHHHHHHHHHHHHHHHHHHHHTT  SS   EEEEEEE:    
ExpBur          :eebbbebebebebeeeeeeeebebbbebbebebbebbeebeeeebeeebebbeebeeebbeebbeebeebbeebeeebeebeeeeeeeeeeebebebebb:    
Contact         :    b b b                                                 b   b  b  bb  b  bb  b   b              b 

queryA       122:CELGPDGRFLRGYEQFAYDGKDYLTLNEDLRSWTAVDTAAQISEQKSNDASEAEHQRAYLEDTCVEWLHKYLEKGKETLLHLEPPKTHVTHHPISDHEAT: 221
                :*  ********** * *******  ********** * ****   *   *  ** ******  *****  *** *****    ***** ***********:
7s8r_A_1     101:CDVGPDGRFLRGYRQDAYDGKDYIALNEDLRSWTAADMAAQITKRKWEAAHAAEQQRAYLEGRCVEWLRRYLENGKETLQRTDPPKTHMTHHPISDHEAT: 200
SecStr          :EEE SSSSEEEEEEEEEETTEEEEEE TTSS EEESSTTHHHHHHHHHHTTHHHHHHHHHHTTHHHHHHHHHHHTTTTSS  B  EEEEEEEE SSSEEE:    
ExpBur          :bbbbeeeeeeebbbebbbeeeebbbbeeebeebebeeebbeebbeeeeeeebbeebeeebeeebbeebeebbeebeeebeeeeebeeebeeeeeeeeebb:    
Contact         :             b b                          b  bb    b  bb  b   b   b   b                             

queryA       222:LRCWALGFYPAEITLTWQQDGEGHTQDTELVETRPAGDGTFQKWAAVVVPSGEEQRYTCHVQHEGLPEPVTLRWK: 296
                :****************** ***  ******************************************* * **** :
7s8r_A_1     201:LRCWALGFYPAEITLTWQRDGEDQTQDTELVETRPAGDGTFQKWAAVVVPSGEEQRYTCHVQHEGLPKPLTLRWE: 275
SecStr          :EEEEEEEEBSS EEEEEEETTEE  TTEEE   EE SSS EEEEEEEEEETT GGGEEEEEEETT SS EEE   :    
ExpBur          :bbbebeebbbbebebebbeeeeeeeeeeeeeeeeeeeeebbebbbbbebeeeebeebbbebebeebeeeeebeee:    


Input Residue Numbers for Focused Sites

ex) 2,15,123