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DOWNLOAD: [sequence-replaced 3D model] [for PyMOL] [3D template] [Modeller script]
ALL MOLECULES IN THE BIOLOGICAL UNIT: |
MOLECULES | contact sites | |||||
model | mark | query | asym_id oper (auth_asym_id) |
type | description | a(query A) |
1 | a | A(HLAE_HUMAN) | A 1 (AAA) | polymer(polypeptide(L)) [276 aa] | HLA class I histocompatibility antigen, alpha chain E :HLAE_HUMAN | |
2 | b | C 1 (CCC) | polymer(polypeptide(L)) [9 aa] | Gag6V(276-284 H4C) | 28Y 30H 66M 83R 84E 87S 90D 91T 94I 98N 101T 102L 105Y 118W 120H 135E 137F(C) 164S 167K 168S 171A 176H 177Q 180Y 188W 192Y (identity: 96.2 %/99.6 %) |
ALIGNMENTS |
MODEL[1] Protein A "queryA" TEMPLATE:7ndu_A_1 identity=99.6% |
queryA 22:GSHSLKYFHTSVSRPGRGEPRFISVGYVDDTQFVRFDNDAASPRMVPRAPWMEQEGSEYWDRETRSARDTAQIFRVNLRTLRGYYNQSEAGSHTLQWMHG: 121 :****************************************************************************************************: 7ndu_A_1 2:GSHSLKYFHTSVSRPGRGEPRFISVGYVDDTQFVRFDNDAASPRMVPRAPWMEQEGSEYWDRETRSARDTAQIFRVNLRTLRGYYNQSEAGSHTLQWMHG: 101 SecStr : EEEEEEEEEE TTSSS EEEEEEEETTEEEEEEETTSSS EE SGGGTT HHHHHHHHHHHHHHHHHHHHHHHHHHHHTT SSS EEEEEEE: ExpBur :eeebbbbebebebeeeeeebebebebebbebebbebeeeeeebebeeebebbeeeeeebbeebbeebeebbeebeeebeebeeeeeeeeeeebebebbbb: Contact : b b b bb b bb b b bb b b b queryA 122:CELGPDGRFLRGYEQFAYDGKDYLTLNEDLRSWTAVDTAAQISEQKSNDASEAEHQRAYLEDTCVEWLHKYLEKGKETLLHLEPPKTHVTHHPISDHEAT: 221 :*************** ************************************************************************************: 7ndu_A_1 102:CELGPDGRFLRGYEQCAYDGKDYLTLNEDLRSWTAVDTAAQISEQKSNDASEAEHQRAYLEDTCVEWLHKYLEKGKETLLHLEPPKTHVTHHPISDHEAT: 201 SecStr :EEE TTSSEEEEEEEEEETTEEEEEE TTSS EEE SHHHHHHHHTTHHHHHTTHHHHHHHTHHHHHHHHHHHHTHHHHS B EEEEEEEE SSSEEE: ExpBur :bebbeeeeeeebbbebbbeeeebbbbeeebeebebeeebbeebeeeeeeebeeeebbeebeeebbebbeebbeebeeebeeeeebeeebeeeeeeeeebb: Contact : b b b bb b bb b b b queryA 222:LRCWALGFYPAEITLTWQQDGEGHTQDTELVETRPAGDGTFQKWAAVVVPSGEEQRYTCHVQHEGLPEPVTLRWKP: 297 :****************************************************************************: 7ndu_A_1 202:LRCWALGFYPAEITLTWQQDGEGHTQDTELVETRPAGDGTFQKWAAVVVPSGEEQRYTCHVQHEGLPEPVTLRWKP: 277 SecStr :EEEEEEEEBSS EEEEEESSSS EE EE SSS EEEEEEEEEESSGGGGEEEEEE TTSSS EEE : ExpBur :bbbbbebbbbbebebebebeeeeeeeeeeeeeeeeeeeebbebbbbbebeeeebeebbbebebeebeeeeeeeeee: |