[pdbjlvh2]Protein Model on 7ndt_A_1_C

Protein Model on 7ndt_A_1_C_1 (TEMPLATE: 7ndt )

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ALL MOLECULES IN THE BIOLOGICAL UNIT:
[assembly_id:1]

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MOLECULES						contact sites
model	mark	query	asym_id oper (auth_asym_id)	type	description	a(query A)
1	a	A(HLAE_HUMAN)	A 1 (AAA)	polymer(polypeptide(L)) [271 aa]	HLA class I histocompatibility antigen, alpha chain E :HLAE_HUMAN
2	b		C 1 (CCC)	polymer(polypeptide(L)) [9 aa]	UL40(15-23 H4C)	26L 28Y 30H 84E 87S 88A 91T 94I 95F 98N 101T 102L 105Y 116L 118W 120H 135E 137F(C) 145L 154W 164S 168S 173E 176H 177Q 180Y 184T 188W 192Y (identity: 96.6 %/98.2 %)

ALIGNMENTS

MODEL[1] Protein A "queryA" TEMPLATE:7ndt_A_1 identity=98.2%

queryA        23:SHSLKYFHTSVSRPGRGEPRFISVGYVDDTQFVRFDNDAASPRMVPRAPWMEQEGSEYWDRETRSARDTAQIFRVNLRTLRGYYNQSEAGSHTLQWMHGC: 122
                :****************************************************************************************************:
7ndt_A_1       3:SHSLKYFHTSVSRPGRGEPRFISVGYVDDTQFVRFDNDAASPRMVPRAPWMEQEGSEYWDRETRSARDTAQIFRVNLRTLRGYYNQSEAGSHTLQWMHGC: 102
SecStr          : EEEEEEEEEE  SSSSS EEEEEEEETTEEEEEEESSSSS S EE SGGGTT  HHHHHHHHHHHHHHHHHHHHHHHHHHHHHT  TTS  EEEEEEEE:    
ExpBur          :eebbebebebebeeeeeebebebebebbebebbebbbeeeeeebeeebebbeebeeebbeeebeebeebbeebeeebeebeeeeeeeeeeebebebbbbb:    
Contact         :   b b b                                                     b  bb  b  bb  b  bb  b          b b b  

queryA       123:ELGPDGRFLRGYEQFAYDGKDYLTLNEDLRSWTAVDTAAQISEQKSNDASEAEHQRAYLEDTCVEWLHKYLEKGKETLLHLEPPKTHVTHHPISDHEATL: 222
                :************** *************************************************************************************:
7ndt_A_1     103:ELGPDGRFLRGYEQCAYDGKDYLTLNEDLRSWTAVDTAAQISEQKSNDASEAEHQRAYLEDTCVEWLHKYLEKGKETLLHLEPPKTHVTHHPISDHEATL: 202
SecStr          :EE TTSSEEEEEEEEEETTEEEEEE TTSS EEE SHHHHHHHHHHHHHTHHHHHHHHHHTHHHHHHHHHHHHTHHHHT  B  EEEEEEE SSSSEEEE:    
ExpBur          :ebbeeeeeeebbbebbbeeeebbbbeeebeebeeeeebbeeebeebeeeeebeebeeebeeebbeebeebbeebeeebeeeeebeeebeeeeeeeeebbb:    
Contact         :            b b       b        b         b   b    b  bb  b   b   b   b                              

queryA       223:RCWALGFYPAEITLTWQQDGEGHTQDTELVETRPAGDGTFQKWAAVVVPSGEEQRYTCHVQHEGLPEPVTLRWKP: 297
                :********************    ***************************************************:
7ndt_A_1     203:RCWALGFYPAEITLTWQQDGXXXXQDTELVETRPAGDGTFQKWAAVVVPSGEEQRYTCHVQHEGLPEPVTLRWKP: 277
SecStr          :EEEEEEEBSS  EEEEEE  ----   EE   EE SSS EEEEEEEEEETT GGGEEEEEE TTSSS EEE    :    
ExpBur          :ebbbeebbbbebebebeeee----eeeeeeeeeeeeeebbebbbbbebeeeebeebbbebebeebeeeeebeeee:

Protein Model on 7ndt_A_1_C_1 (TEMPLATE: 7ndt )

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