Protein Model on 6vb4_A_1_C_1
(TEMPLATE: 
6vb4
)Protein Model on 6vb4_A_1_C_1
(TEMPLATE: 6vb4
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ALL MOLECULES IN THE BIOLOGICAL UNIT: |
| MOLECULES | contact sites | |||||
| model | mark | query | asym_id oper (auth_asym_id) |
type | description | a(query A) |
| 1 | a | A(HLAE_HUMAN) | A 1 (A) | polymer(polypeptide(L)) [276 aa] | MHC class I antigen :F4NBQ8_HUMAN | |
| 2 | b | C 1 (C) | polymer(polypeptide(L)) [9 aa] | Synthetic peptide THR-VAL-ALA-ALA-SER-GLY-HIS-SER-TYR | 26L(M) 28Y 30H(Y) 66M 80Y 83R 84E(N) 87S(I) 90D(T) 91T(N) 94I(T) 95F(Y) 97V(E) 98N(S) 101T(N) 102L 105Y 116L(I) 118W(R) 120H(Y) 137F(S) 144Y 164S(T) 167K 168S(W) 171A 173E 180Y 188W 192Y (identity: 43.3 %/77.9 %) | |
| ALIGNMENTS |
| MODEL[1] Protein A "queryA" TEMPLATE:6vb4_A_1 identity=77.9% |
queryA 22:GSHSLKYFHTSVSRPGRGEPRFISVGYVDDTQFVRFDNDAASPRMVPRAPWMEQEGSEYWDRETRSARDTAQIFRVNLRTLRGYYNQSEAGSHTLQWMHG: 121
:**** ** * *********** ************* ******* ***** **** ***** * * * ** ************* * * *:
6vb4_A_1 1:GSHSMRYFYTAMSRPGRGEPRFIAVGYVDDTQFVRFDSDAASPRMAPRAPWIEQEGPEYWDRNTQISKTNTQTYRESLRNLRGYYNQSEAGSHIIQRMYG: 100
SecStr : EEEEEEEEEE TTSSS EEEEEEEETTEEEEEEETTSSS EE SGGGTT HHHHHHHHHHHHHHHHHHHHHHHHHHHHTT TTS EEEEEEE:
ExpBur :eebebbbebebebbeeeeebebebebebbebebbebebeeeeeebbeebebbeebeeebbeebbeebeebbeebbeebeebeeeeeeeeeeebebebebb:
Contact : b b b b b bb b bb bb bb bb b b b b
queryA 122:CELGPDGRFLRGYEQFAYDGKDYLTLNEDLRSWTAVDTAAQISEQKSNDASEAEHQRAYLEDTCVEWLHKYLEKGKETLLHLEPPKTHVTHHPISDHEAT: 221
:* ***** **** * ******* ***** **** ****** * * *** ***** ***** *** ***** *****************:
6vb4_A_1 101:CDVGPDGRLLRGYDQSAYDGKDYIALNEDLSSWTAADTAAQITQRKWEAAREAEQLRAYLEGLCVEWLRRYLENGKETLQRADPPKTHVTHHPISDHEAT: 200
SecStr :EEE TT EEEEEEEEEETTEEEEEE TTSS EEESSHHHHHHHHHHHHTTHHHHHHHHHHTHHHHHHHHHHHHTHHHHT B EEEEEEEE SSSEEE:
ExpBur :bebbeebeeeebbbebbbeeeebbebeeebeebeeeeebbeebeeebeeeeebeebeebbebebbeebeebbeebeeebeeebebeeebeeeeeeeeebb:
Contact : b b b bb b b b b b
queryA 222:LRCWALGFYPAEITLTWQQDGEGHTQDTELVETRPAGDGTFQKWAAVVVPSGEEQRYTCHVQHEGLPEPVTLRWKP: 297
:****************** *** ************** **************************** * **** *:
6vb4_A_1 201:LRCWALGFYPAEITLTWQRDGEDQTQDTELVETRPAGDRTFQKWAAVVVPSGEEQRYTCHVQHEGLPKPLTLRWEP: 276
SecStr :EEEEEEEEBSS EEEEEETTEE TTT EE EE SSS EEEEEEEEEETT GGGEEEEEE TT SS EEE :
ExpBur :bbbebeebbbbebebebbeeeeebeeebeeeeeeeeeeebbebbbbbebeeeebeebbbbbebeebeeeeebeeee:
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[assembly_id:1]
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