Protein Model on 6uj7_A_1_C_1 (TEMPLATE: 6uj7 )

CurrentView:HTML5 Change to:[JAVA] DOWNLOAD:
[sequence-replaced 3D model] [for PyMOL]
[3D template]
[Modeller script]

ALL MOLECULES IN THE BIOLOGICAL UNIT:
[assembly_id:1]

Window size :
[small] [medium] [large]

[help]


MOLECULES contact sites
model mark query asym_id oper
(auth_asym_id)
type description a(query A)
1 a A(HLAE_HUMAN) A 1 (A) polymer(polypeptide(L)) [280 aa] HLA class I histocompatibility antigen, B-7 alpha chain :1B07_HUMAN
2 b C 1 (C) polymer(polypeptide(L)) [10 aa] Isocitrate dehydrogenase [NADP], mitochondrial :IDHP_HUMAN 26L(M) 28Y 30H(Y) 80Y 84E(N) 87S(I) 88A(Y) 91T(Q) 94I(T) 97V(E) 98N(S) 101T(N) 105Y 116L 120H(Y) 137F(Y) 144Y 164S(T) 168S(W) 171A 173E 176H(Q) 177Q(R) 180Y 188W 192Y (identity: 38.5 %/78.9 %)
ALIGNMENTS
MODEL[1] Protein A "queryA" TEMPLATE:6uj7_A_1 identity=78.9%
queryA        22:GSHSLKYFHTSVSRPGRGEPRFISVGYVDDTQFVRFDNDAASPRMVPRAPWMEQEGSEYWDRETRSARDTAQIFRVNLRTLRGYYNQSEAGSHTLQWMHG: 121
                :****  ** **************************** ******  ***** **** ***** *      **  *  ** **************** * *:
6uj7_A_1       2:GSHSMRYFYTSVSRPGRGEPRFISVGYVDDTQFVRFDSDAASPREEPRAPWIEQEGPEYWDRNTQIYKAQAQTDRESLRNLRGYYNQSEAGSHTLQSMYG: 101
SecStr          :  EEEEEEEEEE  SSSS  EEEEEEEETTEEEEEEETTSSS   EE SGGGGGS HHHHHHHHHHHHHHHHHHHHHHHHHHHHTT  SSS  EEEEEEE:    
ExpBur          :eebebbbebebebeeeeeebebebebebbebebbebeeeeeeeebeeebebbeebeeebbeebbeebeebeeebeeebeebeeeeeeeeeeebebebbbb:    
Contact         :    b b b                                                 b   b  bb  b  b  bb  b   b          b   b 

queryA       122:CELGPDGRFLRGYEQFAYDGKDYLTLNEDLRSWTAVDTAAQISEQKSNDASEAEHQRAYLEDTCVEWLHKYLEKGKETLLHLEPPKTHVTHHPISDHEAT: 221
                :*  ***** ***  * *******  ********** ******   *   * ***  *****  *****  *** **  *    *****************:
6uj7_A_1     102:CDVGPDGRLLRGHDQYAYDGKDYIALNEDLRSWTAADTAAQITQRKWEAAREAEQRRAYLEGECVEWLRRYLENGKDKLERADPPKTHVTHHPISDHEAT: 201
SecStr          :EEE TTS EEEEEEEEEETTEEEEEE TTSS EEESSHHHHHHHHHHHHHTHHHHHHHHHHTHHHHHHHHHHHHTHHHHS  B  EEEEEEEE SSSEEE:    
ExpBur          :bbbbeebeeeebbbebbbeeeebbebeeebeebeeeeebbeebeeebeeeeebeebeeebeeebbeebeebbeebeeebebeeebeeebeeeeeeeeebb:    
Contact         :               b      b                   b   b  b b  bb  b       b   b                             

queryA       222:LRCWALGFYPAEITLTWQQDGEGHTQDTELVETRPAGDGTFQKWAAVVVPSGEEQRYTCHVQHEGLPEPVTLRWKPASQ: 300
                :****************** ***  ************** **************************** * **** * **:
6uj7_A_1     202:LRCWALGFYPAEITLTWQRDGEDQTQDTELVETRPAGDRTFQKWAAVVVPSGEEQRYTCHVQHEGLPKPLTLRWEPSSQ: 280
SecStr          :EEEEEEEEBSS  EEEEEETTEE GGG EE   EE SSS EEEEEEEEEETT GGGEEEEEE TTSSS EEE     S :    
ExpBur          :bbbebebbbbbebebebeeeeeebeeebeeeeeeeeeeebbebbbbbebeeeebeebbbbbebeebeeeeebeeeeeee:    


Input Residue Numbers for Focused Sites

ex) 2,15,123