[pdbjlvh2]Protein Model on 6j2a_A_1_C

Protein Model on 6j2a_A_1_C_1 (TEMPLATE: 6j2a )

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ALL MOLECULES IN THE BIOLOGICAL UNIT:
[assembly_id:1]

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MOLECULES						contact sites
model	mark	query	asym_id oper (auth_asym_id)	type	description	a(query A)
1	a	A(HLAE_HUMAN)	A 1 (A)	polymer(polypeptide(L)) [274 aa]	HLA-A*3003
2	b		C 1 (C)	polymer(polypeptide(L)) [9 aa]	NP44	26L(M) 28Y 66M 83R(Q) 84E 87S(N) 91T(H) 94I(T) 97V(E) 98N 101T 102L 105Y 116L(I) 118W(I) 120H(Y) 135E 137F(H) 144Y 164S(T) 167K 168S(W) 173E(R) 177Q(L) 180Y 184T 188W 192Y (identity: 50.0 %/79.6 %)

ALIGNMENTS

MODEL[1] Protein A "queryA" TEMPLATE:6j2a_A_1 identity=79.6%

queryA        22:GSHSLKYFHTSVSRPGRGEPRFISVGYVDDTQFVRFDNDAASPRMVPRAPWMEQEGSEYWDRETRSARDTAQIFRVNLRTLRGYYNQSEAGSHTLQWMHG: 121
                :****  ** ******* ****** ************* **** ** ***** **** **** ***      *  * ** *************** * * *:
6j2a_A_1       1:GSHSMRYFSTSVSRPGSGEPRFIAVGYVDDTQFVRFDSDAASQRMEPRAPWIEQEGPEYWDQETRNVKAHSQTDRENLGTLRGYYNQSEAGSHTIQIMYG: 100
SecStr          :  EEEEEEEEEE  TTTS  EEEEEEEETTEEEEEEETTSSS S EE SGGGTT  HHHHHHHHHHHHHHHHHHHHHHHHHHHHTT  SSS  EEEEEEE:    
ExpBur          :eebebbbebebebeeeeeebebebebebbebebbebbeebeeeebbeebebbeebeeebbeebbeebeebbeebeeebeebeeeeeeeeeeebebebbeb:    
Contact         :    b b                                     b                bb  b   b  b  bb  bb  b          b b b 

queryA       122:CELGPDGRFLRGYEQFAYDGKDYLTLNEDLRSWTAVDTAAQISEQKSNDASEAEHQRAYLEDTCVEWLHKYLEKGKETLLHLEPPKTHVTHHPISDHEAT: 221
                :*  * ********** *******  ********** * ****   *   *  **  ***** ******  *** *****    ***** ***********:
6j2a_A_1     101:CDVGSDGRFLRGYEQHAYDGKDYIALNEDLRSWTAADMAAQITQRKWEAARRAEQLRAYLEGTCVEWLRRYLENGKETLQRTDPPKTHMTHHPISDHEAT: 200
SecStr          :EEE TTS EEEEEEEEEETTEEEEEE TTSS EEESSHHHHHHHHHHHHTTHHHHHHHHHHTHHHHHHHHHHHHTHHHHT  B  EEEEEEEE SSSEEE:    
ExpBur          :bbbbeebeeeebebebbbeeeebbbbeeebeebeeeeebbeebbeebeeeeebeebbeebeeebbeebeebbeebeeebeeeeebeeebebeeeeeeebb:    
Contact         :             b b      b                   b  bb    b   b  b   b   b   b                             

queryA       222:LRCWALGFYPAEITLTWQQDGEGHTQDTELVETRPAGDGTFQKWAAVVVPSGEEQRYTCHVQHEGLPEPVTLRW: 295
                :****************** ***  ******************************************* * ****:
6j2a_A_1     201:LRCWALGFYPAEITLTWQRDGEDQTQDTELVETRPAGDGTFQKWAAVVVPSGEEQRYTCHVQHEGLPKPLTLRW: 274
SecStr          :EEEEEEEEBSS  EEEEEETTEEE TTEEE   EE SSS EEEEEEEEEETT GGGEEEEEE TT SS EEE  :    
ExpBur          :bebbbeebbbbebebebeeeeeebeeeeeeeeeeeeeeebbebbbbbebeeeebeebbbbbebeebeeeeebee:

Protein Model on 6j2a_A_1_C_1 (TEMPLATE: 6j2a )

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