[pdbjlvh2]Protein Model on 6bxp_A_1_C

Protein Model on 6bxp_A_1_C_1 (TEMPLATE: 6bxp )

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ALL MOLECULES IN THE BIOLOGICAL UNIT:
[assembly_id:1]

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MOLECULES						contact sites
model	mark	query	asym_id oper (auth_asym_id)	type	description	a(query A)
1	a	A(HLAE_HUMAN)	A 1 (A)	polymer(polypeptide(L)) [275 aa]	HLA class I histocompatibility antigen, B-57 alpha chain :1B57_HUMAN
2	b		C 1 (C)	polymer(polypeptide(L)) [6 aa]	HIV peptide RKV-Kyn	26L(M) 28Y 30H(Y) 66M 80Y 84E 87S(N) 88A(M) 94I(T) 97V(E) 98N 101T(I) 102L(A) 105Y 116L(I) 120H(Y) 135E(D) 137F(S) 139Y 144Y 164S(T) 167K 168S(W) 171A 173E(V) 176H(Q) 177Q(L) 180Y 188W 192Y (identity: 43.3 %/77.1 %)

ALIGNMENTS

MODEL[1] Protein A "queryA" TEMPLATE:6bxp_A_1 identity=77.1%

queryA        22:GSHSLKYFHTSVSRPGRGEPRFISVGYVDDTQFVRFDNDAASPRMVPRAPWMEQEGSEYWDRETRSARDTAQIFRVNLRTLRGYYNQSEAGSHTLQWMHG: 121
                :****  ** *  *********** ************* ******* ***** **** **** ***     **  * ***    **********  * * *:
6bxp_A_1       1:GSHSMRYFYTAMSRPGRGEPRFIAVGYVDDTQFVRFDSDAASPRMAPRAPWIEQEGPEYWDGETRNMKASAQTYRENLRIALRYYNQSEAGSHIIQVMYG: 100
SecStr          :  EEEEEEEEEE  TTSSS EEEEEEEETTEEEEEEETTSSS   EE SGGGTTS HHHHHHHHHHHHHHHHHHHHHHHHHHHHTT  TTS  EEEEEEE:    
ExpBur          :eebebbbebebebbeeeeebebebbbebbebebbebebeeeeeebeeebebbeebeeebbebebeebeebbeebbeebebbbeeeeeeeeeebebebebb:    
Contact         :    b b b                                   b             b   b  bb     b  bb  bb  b          b   b 

queryA       122:CELGPDGRFLRGYEQFAYDGKDYLTLNEDLRSWTAVDTAAQISEQKSNDASEAEHQRAYLEDTCVEWLHKYLEKGKETLLHLEPPKTHVTHHPISDHEAT: 221
                :*  ***** ***  * *******  ***** **** ******   *   *  **  *****  *****  *** *****    *****************:
6bxp_A_1     101:CDVGPDGRLLRGHDQSAYDGKDYIALNEDLSSWTAADTAAQITQRKWEAARVAEQLRAYLEGLCVEWLRRYLENGKETLQRADPPKTHVTHHPISDHEAT: 200
SecStr          :EEE TT  EEEEEEEEEETTEEEEEE TTSS EEESSHHHHHHHHHHHHTTHHHHHHHHHHTHHHHHHHHHHHHTHHHHT  B  EEEEEEEE SSSEEE:    
ExpBur          :bebbeebeeeebbbebbbeeeebbbbeeebeebebeeebbeebbeeeeeeebbeebeeebeeebbeebeebbeebeeebeeebebeeebeeeeeeeeebb:    
Contact         :             b b b    b                   b  bb  b b  bb  b       b   b                             

queryA       222:LRCWALGFYPAEITLTWQQDGEGHTQDTELVETRPAGDGTFQKWAAVVVPSGEEQRYTCHVQHEGLPEPVTLRWK: 296
                :****************** ***  ************** **************************** * **** :
6bxp_A_1     201:LRCWALGFYPAEITLTWQRDGEDQTQDTELVETRPAGDRTFQKWAAVVVPSGEEQRYTCHVQHEGLPKPLTLRWE: 275
SecStr          :EEEEEEEEBSS  EEEEEETTEE TTT EE   EE SSS EEEEEEEEEETT GGGEEEEEE TT SS EEE   :    
ExpBur          :bbbbbebbbbbebebebeeeeeebeeebeebeeeeeeeebbebbbbbebeeeebeebbbebebeebeeeeebeee:

Protein Model on 6bxp_A_1_C_1 (TEMPLATE: 6bxp )

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