[pdbjlvh2]Protein Model on 5wkf_A_1_C

Protein Model on 5wkf_A_1_C_1 (TEMPLATE: 5wkf )

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ALL MOLECULES IN THE BIOLOGICAL UNIT:
[assembly_id:1]

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MOLECULES						contact sites
model	mark	query	asym_id oper (auth_asym_id)	type	description	a(query A)
1	a	A(HLAE_HUMAN)	A 1 (A)	polymer(polypeptide(L)) [274 aa]	HLA class I histocompatibility antigen, A-11 alpha chain :1A11_HUMAN
2	b		C 1 (C)	polymer(polypeptide(L)) [10 aa]	GTS1 peptide	26L(M) 28Y 30H(Y) 66M 84E 87S(N) 90D(A) 91T(Q) 94I(T) 95F(D) 97V 98N(D) 101T 102L 105Y 116L(I) 118W(I) 120H(Y) 137F(D) 164S(T) 167K 168S(W) 173E(A) 176H(Q) 177Q 180Y 188W 192Y (identity: 42.9 %/79.6 %)

ALIGNMENTS

MODEL[1] Protein A "queryA" TEMPLATE:5wkf_A_1 identity=79.6%

queryA        22:GSHSLKYFHTSVSRPGRGEPRFISVGYVDDTQFVRFDNDAASPRMVPRAPWMEQEGSEYWDRETRSARDTAQIFRVNLRTLRGYYNQSEAGSHTLQWMHG: 121
                :****  ** ************** ************* **** ** ***** **** **** ***      *  ** * ********** **** * * *:
5wkf_A_1       1:GSHSMRYFYTSVSRPGRGEPRFIAVGYVDDTQFVRFDSDAASQRMEPRAPWIEQEGPEYWDQETRNVKAQSQTDRVDLGTLRGYYNQSEDGSHTIQIMYG: 100
SecStr          :  EEEEEEEEEE  TTS S EEEEEEEETTEEEEEEETTSSS S EE SGGGTTS HHHHHHHHHHHHHHHHHHHHHHHHHHHHTT  SSS  EEEEEEE:    
ExpBur          :eebbbbbebebebeeeeeebebebbbebeeeebbebbbeeeeeebeeebebbeebeeebbeebbeebeeebeebeeebeebeeeeeeeeeeebebebbbb:    
Contact         :    b b b                                   b                 b  b  bb  bb bb  bb  b          b b b 

queryA       122:CELGPDGRFLRGYEQFAYDGKDYLTLNEDLRSWTAVDTAAQISEQKSNDASEAEHQRAYLEDTCVEWLHKYLEKGKETLLHLEPPKTHVTHHPISDHEAT: 221
                :*  ********** * *******  ********** * ****   *   *  ** ******  *****  *** *****    ***** ***********:
5wkf_A_1     101:CDVGPDGRFLRGYRQDAYDGKDYIALNEDLRSWTAADMAAQITKRKWEAAHAAEQQRAYLEGRCVEWLRRYLENGKETLQRTDPPKTHMTHHPISDHEAT: 200
SecStr          :EEE TT  EEEEEEEEEETTEEEEEE TTSS EEESSHHHHHHHHHHHHTTHHHHHHHHHHTHHHHHHHHHHHHTHHHHS  B  EEEEEEEESSSSEEE:    
ExpBur          :bebbeebeeeebbbebbbeeeebbebeeebeebebeeebbeebbeeeeeeebbeebbeebeeebbeebeebbeebeeebeeeeebeeebeeeeeeeeebb:    
Contact         :               b                          b  bb    b  bb  b       b   b                             

queryA       222:LRCWALGFYPAEITLTWQQDGEGHTQDTELVETRPAGDGTFQKWAAVVVPSGEEQRYTCHVQHEGLPEPVTLRW: 295
                :****************** ***  ******************************************* * ****:
5wkf_A_1     201:LRCWALGFYPAEITLTWQRDGEDQTQDTELVETRPAGDGTFQKWAAVVVPSGEEQRYTCHVQHEGLPKPLTLRW: 274
SecStr          :EEEEEEEEBSS EEEEEEETTEE  TTEEE   EE SSS EEEEEEEEEETT TTTEEEEEEETT SS EEEE :    
ExpBur          :bbbbbebbbbbebebebbeeeeebeeeeeeeeeeeeeeebbebbbbbebeeeebeebbbebebebbeeeeebee:

Protein Model on 5wkf_A_1_C_1 (TEMPLATE: 5wkf )

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