Protein Model on 5w67_A_1_C_1
(TEMPLATE: 
5w67
)Protein Model on 5w67_A_1_C_1
(TEMPLATE: 5w67
)| CurrentView:HTML5 Change to:[JAVA] |
DOWNLOAD: [sequence-replaced 3D model]
[for PyMOL] [3D template] [Modeller script]
ALL MOLECULES IN THE BIOLOGICAL UNIT: |
| MOLECULES | contact sites | |||||
| model | mark | query | asym_id oper (auth_asym_id) |
type | description | a(query A) |
| 1 | a | A(HLAE_HUMAN) | A 1 (A) | polymer(polypeptide(L)) [273 aa] | HLA class I histocompatibility antigen, Cw-6 alpha chain :1C06_HUMAN | |
| 2 | b | C 1 (C) | polymer(polypeptide(L)) [9 aa] | VAL-ARG-SER-ARG-ARG-ABA-LEU-ARG-LEU | 26L(M) 28Y 30H(D) 45S 80Y 84E 87S(K) 88A(Y) 90D(R) 91T(Q) 94I(A) 98N 101T(K) 102L 105Y 118W 120H(Y) 164S(T) 167K 168S(W) 173E 176H(Q) 177Q(W) 180Y 188W 192Y (identity: 50.0 %/82.1 %) | |
| ALIGNMENTS |
| MODEL[1] Protein A "queryA" TEMPLATE:5w67_A_1 identity=82.1% |
queryA 23:SHSLKYFHTSVSRPGRGEPRFISVGYVDDTQFVRFDNDAASPRMVPRAPWMEQEGSEYWDRETRSARDTAQIFRVNLRTLRGYYNQSEAGSHTLQWMHGC: 122
:*** ** * ************************** ****** ***** **** ******* ** ***** ********* ******** **:
5w67_A_1 2:SHSMRYFDTAVSRPGRGEPRFISVGYVDDTQFVRFDSDAASPRGEPRAPWVEQEGPEYWDRETQKYKRQAQADRVNLRKLRGYYNQSEDGSHTLQWMYGC: 101
SecStr : EEEEEEEEE SSSS EEEEEEEETTEEEEEEETTSSS EE SGGGTTS HHHHHHHHHHHHHHHHHHHHHHHHHHHHTT TTS EEEEEEEE:
ExpBur :eebbbbebebebeeeeeebebebebebbeeebbebeeeeeeeebeeebebbeeeeeebbeebbeebeeebeebeeebeebbeeeeeeeeeebebebbbbb:
Contact : b b b b b b bb bb b b bb b b b
queryA 123:ELGPDGRFLRGYEQFAYDGKDYLTLNEDLRSWTAVDTAAQISEQKSNDASEAEHQRAYLEDTCVEWLHKYLEKGKETLLHLEPPKTHVTHHPISDHEATL: 222
: ****** **** * ******* ********** ****** * * *** ***** ****** *** ***** * ********* *******:
5w67_A_1 102:DLGPDGRLLRGYDQSAYDGKDYIALNEDLRSWTAADTAAQITQRKWEAAREAEQWRAYLEGTCVEWLRRYLENGKETLQRAEHPKTHVTHHPVSDHEATL: 201
SecStr :EE TTSSEEEEEEEEEETTEEEEEE TTSS EEESSHHHHHHHHHHHHHTHHHHHHHHHHTHHHHHHHHHHHHTHHHHS B EEEEEEEE SSSEEEE:
ExpBur :bbbeeebbeebbbebbbeeeebbebeeebeebeeeeebbeebbeeeeeeeebeebbeebebebbeebeebbeebeeebeeeeebeeebeeeeeeeeebbb:
Contact : b bb b bb b b b
queryA 223:RCWALGFYPAEITLTWQQDGEGHTQDTELVETRPAGDGTFQKWAAVVVPSGEEQRYTCHVQHEGLPEPVTLRW: 295
:***************** *** ********************************************* ****:
5w67_A_1 202:RCWALGFYPAEITLTWQRDGEDQTQDTELVETRPAGDGTFQKWAAVVVPSGEEQRYTCHVQHEGLPEPLTLRW: 274
SecStr :EEEEEEEBSS EEEEEEETTEE TTEEE EE SSS EEEEEEEEEETT GGGEEEEEEETT SS EEE :
ExpBur :ebbbebbbbbebebebbeeeeeeeeeeeeeeeeeeeeebbebbbbbebeeeebeebbbbbebeebeeeeebee:
|
[assembly_id:1]
[help]