Protein Model on 5vge_A_1_C_1
(TEMPLATE: 
5vge
)Protein Model on 5vge_A_1_C_1
(TEMPLATE: 5vge
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ALL MOLECULES IN THE BIOLOGICAL UNIT: |
| MOLECULES | contact sites | |||||
| model | mark | query | asym_id oper (auth_asym_id) |
type | description | a(query A) |
| 1 | a | A(HLAE_HUMAN) | A 1 (A) | polymer(polypeptide(L)) [275 aa] | cDNA FLJ54183, highly similar to HLA class I histocompatibility antigen, Cw-7 alpha chain :B4DVY0_HUMAN | |
| 2 | b | C 1 (C) | polymer(polypeptide(L)) [9 aa] | ARG-TYR-ARG-PRO-GLY-THR-VAL-ALA-LEU | 28Y 30H(D) 43F 45S 80Y 83R 84E 87S(K) 88A(Y) 91T(Q) 94I(A) 97V 98N(S) 101T(N) 102L 105Y 116L 118W(R) 120H(S) 135E(D) 164S(T) 167K 168S(L) 171A 176H(Q) 177Q(L) 180Y 184T 188W 192Y (identity: 53.3 %/79.6 %) | |
| ALIGNMENTS |
| MODEL[1] Protein A "queryA" TEMPLATE:5vge_A_1 identity=79.6% |
queryA 23:SHSLKYFHTSVSRPGRGEPRFISVGYVDDTQFVRFDNDAASPRMVPRAPWMEQEGSEYWDRETRSARDTAQIFRVNLRTLRGYYNQSEAGSHTLQWMHGC: 122
:*** ** * ************************** ****** ***** **** ******* ** ** ** ********* ****** * **:
5vge_A_1 2:SHSMRYFDTAVSRPGRGEPRFISVGYVDDTQFVRFDSDAASPRGEPRAPWVEQEGPEYWDRETQKYKRQAQADRVSLRNLRGYYNQSEDGSHTLQRMSGC: 101
SecStr : EEEEEEEEE TTTSS EEEEEEEETTEEEEEEETTSSS EE STTTTT HHHHHHHHHHHHHHHHHHHHHHHHHHHHTT TTS EEEEEEEE:
ExpBur :eebbbbebebebbeeeeebebebebebeeeebbebebeeeeeebeeebebbeebeeebbeebbeebeeebeebbeebebbeeeeeeeeeeebebebebbb:
Contact : b b b b b bb bb b b bb bb b b b b
queryA 123:ELGPDGRFLRGYEQFAYDGKDYLTLNEDLRSWTAVDTAAQISEQKSNDASEAEHQRAYLEDTCVEWLHKYLEKGKETLLHLEPPKTHVTHHPISDHEATL: 222
: ****** **** * ******* ********** ****** * * ** ***** ****** *** ***** *********** *******:
5vge_A_1 102:DLGPDGRLLRGYDQSAYDGKDYIALNEDLRSWTAADTAAQITQRKLEAARAAEQLRAYLEGTCVEWLRRYLENGKETLQRAEPPKTHVTHHPLSDHEATL: 201
SecStr :EE SSS EEEEEEEEEETTEEEEEE TTSS EEESSTHHHHHHHHHHHHTHHHHHHHHHHTHHHHHHHHHHHHTHHHHT B EEEEEEEESSSSEEEE:
ExpBur :bbeeeeeeeebbbebbbeeeebbebeeebeebeeeeebbeebeeeeeeeebbeeeeeebeeebbeebeebbeebeeebeeeeebeeebbeeeeeeeebbb:
Contact : b b bb b bb b b b b
queryA 223:RCWALGFYPAEITLTWQQDGEGHTQDTELVETRPAGDGTFQKWAAVVVPSGEEQRYTCHVQHEGLPEPVTLRWKP: 297
:***************** *** **************************** ******* ***** ** ** * *:
5vge_A_1 202:RCWALGFYPAEITLTWQRDGEDQTQDTELVETRPAGDGTFQKWAAVVVPSGQEQRYTCHMQHEGLQEPLTLSWEP: 276
SecStr :EEEEEEEBSS EEEEEEETTEE TTT EE EE SSS EEEEEEEEEETT GGGEEEEEEETT SS EEE :
ExpBur :bbbbeebbbbebebebbeeeeebeeebeeeeeeeeeeebbebbbbbebeeeebeebebbbebebeeeeeebeeee:
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[assembly_id:1]
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