Protein Model on 5vgd_A_1_C_1
(TEMPLATE: 
5vgd
)Protein Model on 5vgd_A_1_C_1
(TEMPLATE: 5vgd
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ALL MOLECULES IN THE BIOLOGICAL UNIT: |
| MOLECULES | contact sites | |||||
| model | mark | query | asym_id oper (auth_asym_id) |
type | description | a(query A) |
| 1 | a | A(HLAE_HUMAN) | A 1 (A) | polymer(polypeptide(L)) [273 aa] | HLA class I histocompatibility antigen, Cw-5 alpha chain :1C05_HUMAN | |
| 2 | b | C 1 (C) | polymer(polypeptide(L)) [9 aa] | SER-ALA-GLU-PRO-VAL-PRO-LEU-GLN-LEU | 26L(M) 28Y 30H(Y) 84E 87S(K) 90D(R) 91T(Q) 94I(T) 98N 101T(K) 102L 105Y 118W(R) 120H(Y) 135E(N) 137F 164S(T) 167K 168S(W) 177Q(R) 180Y 188W 192Y (identity: 43.5 %/81.0 %) | |
| ALIGNMENTS |
| MODEL[1] Protein A "queryA" TEMPLATE:5vgd_A_1 identity=81.0% |
queryA 23:SHSLKYFHTSVSRPGRGEPRFISVGYVDDTQFVRFDNDAASPRMVPRAPWMEQEGSEYWDRETRSARDTAQIFRVNLRTLRGYYNQSEAGSHTLQWMHGC: 122
:*** ** * ************ ********** ** ****** ***** **** ******* ** ***** **************** * **:
5vgd_A_1 1:SHSMRYFYTAVSRPGRGEPRFIAVGYVDDTQFVQFDSDAASPRGEPRAPWVEQEGPEYWDRETQKYKRQAQTDRVNLRKLRGYYNQSEAGSHTLQRMYGC: 100
SecStr : EEEEEEEEE SSSS EEEEEEEETTEEEEEEES SSS EE SGGGSSS HHHHHHHHHHHHHHHHHHHHHHHHHHHHTT SSS EEEEEEEE:
ExpBur :eebbebebebebeeeeeebebebebebbeebbbebebeeeeeebeeebebbeebeeebbeebbeebeebbeebeeebeebbeeeeeeeeeebebebbbbb:
Contact : b b b b b bb b b bb b b b
queryA 123:ELGPDGRFLRGYEQFAYDGKDYLTLNEDLRSWTAVDTAAQISEQKSNDASEAEHQRAYLEDTCVEWLHKYLEKGKETLLHLEPPKTHVTHHPISDHEATL: 222
: ****** **** ********* ********** * **** * * *** ***** ****** *** ** ** * ********* *******:
5vgd_A_1 101:DLGPDGRLLRGYNQFAYDGKDYIALNEDLRSWTAADKAAQITQRKWEAAREAEQRRAYLEGTCVEWLRRYLENGKKTLQRAEHPKTHVTHHPVSDHEATL: 200
SecStr :EE SSSSEEEEEEEEEETTEEEEEE TTSS EEE SHHHHHHHHHHHHHTHHHHHHHHHHTHHHHHHHHHHHHTTTTTT B EEEEEE SSSEEEE:
ExpBur :bbbeeeebeebbbebbbeeeebbebeeebeebebeeebbeebbeebeeeebbeeeeeebeeebbeebeebbeebeeebeeeeebeeebeeeeeeeeebbb:
Contact : b b b bb b b b b
queryA 223:RCWALGFYPAEITLTWQQDGEGHTQDTELVETRPAGDGTFQKWAAVVVPSGEEQRYTCHVQHEGLPEPVTLRW: 295
:***************** *** ********************************************* ****:
5vgd_A_1 201:RCWALGFYPAEITLTWQRDGEDQTQDTELVETRPAGDGTFQKWAAVVVPSGEEQRYTCHVQHEGLPEPLTLRW: 273
SecStr :EEEEEEEBSS EEEEETTEE TTT EE EE SSS EEEEEEEEEETT GGGEEEEE TT SS EEE :
ExpBur :bbebeebbbeeeebbbeeeeeebeeeeeeeebeeeeeebbebbbbbebeeeebeebbbbbebeebeeeeebee:
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[assembly_id:1]
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