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ALL MOLECULES IN THE BIOLOGICAL UNIT: |
MOLECULES | contact sites | |||||
model | mark | query | asym_id oper (auth_asym_id) |
type | description | a(query A) |
1 | a | A(HLAE_HUMAN) | A 1 (A) | polymer(polypeptide(L)) [278 aa] | HLA class I histocompatibility antigen, B-81 alpha chain :1B81_HUMAN | |
2 | b | C 1 (C) | polymer(polypeptide(L)) [9 aa] | GAG protein :Q70A36_9HIV1 | 28Y 30H(Y) 83R 84E(N) 87S(I) 88A(Y) 90D(A) 91T(Q) 94I(T) 97V(E) 98N(S) 101T(N) 105Y 116L 120H(Y) 135E(N) 137F(Y) 164S 168S(L) 173E(V) 176H(Q) 177Q(D) 180Y 184T(E) 188W 192Y (identity: 30.8 %/78.3 %) |
ALIGNMENTS |
MODEL[1] Protein A "queryA" TEMPLATE:4u1i_A_1 identity=78.3% |
queryA 22:GSHSLKYFHTSVSRPGRGEPRFISVGYVDDTQFVRFDNDAASPRMVPRAPWMEQEGSEYWDRETRSARDTAQIFRVNLRTLRGYYNQSEAGSHTLQWMHG: 121 :**** ** **************************** ****** ***** **** ***** * ** * ** **************** * *: 4u1i_A_1 2:GSHSMRYFYTSVSRPGRGEPRFISVGYVDDTQFVRFDSDAASPREEPRAPWIEQEGPEYWDRNTQIYKAQAQTDRESLRNLRGYYNQSEAGSHTLQSMYG: 101 SecStr : EEEEEEEEEE TTS S EEEEEEEETTEEEEEEETTSSS EE SGGGTTS HHHHHHHHHHHHHHHHHHHHHHHHHHHHTT TTS EEEEEEE: ExpBur :eebebbbebebebbeeeeebebebebebeebebbebeeeeeeeebeeebebbeebeeebbeebbeebeeebeebbeebeebeebeeeeeeeebebebebb: Contact : b b bb bb bb b bb b b b b queryA 122:CELGPDGRFLRGYEQFAYDGKDYLTLNEDLRSWTAVDTAAQISEQKSNDASEAEHQRAYLEDTCVEWLHKYLEKGKETLLHLEPPKTHVTHHPISDHEAT: 221 :* ***** *** * ******* ********** ******* * * ** ***** ***** *** ** * *****************: 4u1i_A_1 102:CDVGPDGRLLRGHNQYAYDGKDYIALNEDLRSWTAADTAAQISQRKLEAARVAEQDRAYLEGECVEWLRRYLENGKDKLERADPPKTHVTHHPISDHEAT: 201 SecStr :EEE TTS EEEEEEEEEETTEEEEEE TTSS EEESSHHHHHHHHHHHHTTHHHHHHHHHHTHHHHHHHHHHHHTHHHHT B EEEEEEEESSSSEEE: ExpBur :bebbeebeeeebbbeebbeeeebbebeeebeebeeeeebbeebeeebeeeeebeebeeebebebbeebeebbeebeeebeeebebeeebeeeeeeeeebb: Contact : b b b b b bb b b b b queryA 222:LRCWALGFYPAEITLTWQQDGEGHTQDTELVETRPAGDGTFQKWAAVVVPSGEEQRYTCHVQHEGLPEPVTLRWKPA: 298 :****************** *** ************** ***** ********************** * **** * : 4u1i_A_1 202:LRCWALGFYPAEITLTWQRDGEDQTQDTELVETRPAGDRTFQKWTAVVVPSGEEQRYTCHVQHEGLPKPLTLRWEPS: 278 SecStr :EEEEEEEEBSS EEEEEETTEE TTEEE EE SSS EEEEEEEEEETT GGGEEEEEE TT SS EEE : ExpBur :bbbbbebbbbbebebebbeeeeebeeeeeebeeeeeeeebbebbbbbebeeeebeebbbbbebeebeeeeebeeeee: |