[pdbjlvh2]Protein Model on 4u1h_A_1_C

Protein Model on 4u1h_A_1_C_1 (TEMPLATE: 4u1h )

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ALL MOLECULES IN THE BIOLOGICAL UNIT:
[assembly_id:1]

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MOLECULES						contact sites
model	mark	query	asym_id oper (auth_asym_id)	type	description	a(query A)
1	a	A(HLAE_HUMAN)	A 1 (A)	polymer(polypeptide(L)) [277 aa]	HLA class I histocompatibility antigen, B-7 alpha chain :1B07_HUMAN
2	b		C 1 (C)	polymer(polypeptide(L)) [9 aa]	GAG protein :Q70A36_9HIV1	28Y 30H(Y) 80Y 83R 84E(N) 87S(I) 88A(Y) 91T(Q) 94I(T) 98N(S) 101T(N) 105Y 116L 120H(Y) 135E(D) 144Y 164S(T) 168S(W) 173E 177Q(R) 180Y 188W 192Y (identity: 43.5 %/79.0 %)

ALIGNMENTS

MODEL[1] Protein A "queryA" TEMPLATE:4u1h_A_1 identity=79.0%

queryA        22:GSHSLKYFHTSVSRPGRGEPRFISVGYVDDTQFVRFDNDAASPRMVPRAPWMEQEGSEYWDRETRSARDTAQIFRVNLRTLRGYYNQSEAGSHTLQWMHG: 121
                :****  ** **************************** ******  ***** **** ***** *      **  *  ** **************** * *:
4u1h_A_1       2:GSHSMRYFYTSVSRPGRGEPRFISVGYVDDTQFVRFDSDAASPREEPRAPWIEQEGPEYWDRNTQIYKAQAQTDRESLRNLRGYYNQSEAGSHTLQSMYG: 101
SecStr          :  EEEEEEEEEE  TTS S EEEEEEEETTEEEEEEETTSSS   EE SGGGTTS HHHHHHHHHHHHHHHHHHHHHHHHHHHHTT  SSS  EEEEEEE:    
ExpBur          :eebebbbebebebbeeeeebebebebebbebebbebeeeeeeeebeeebebbeebeeebbeebbeebeeebeebbeebeebeeeeeeeeeeebebebbbb:    
Contact         :      b b                                                 b  bb  bb  b  b   b  b   b          b   b 

queryA       122:CELGPDGRFLRGYEQFAYDGKDYLTLNEDLRSWTAVDTAAQISEQKSNDASEAEHQRAYLEDTCVEWLHKYLEKGKETLLHLEPPKTHVTHHPISDHEAT: 221
                :*  ***** ***  * *******  ********** ******   *   * ***  *****  *****  *** **  *    *****************:
4u1h_A_1     102:CDVGPDGRLLRGHDQYAYDGKDYIALNEDLRSWTAADTAAQITQRKWEAAREAEQRRAYLEGECVEWLRRYLENGKDKLERADPPKTHVTHHPISDHEAT: 201
SecStr          :EEE TTS EEEEEEEEEETTEEEEEE TTSS EEESSHHHHHHHHHHHHTTHHHHHHHHHHTHHHHHHHHHHHHTHHHHT  B  EEEEEEEESSSSEEE:    
ExpBur          :bebbeebeeeebbbebbbeeeebbebeeebeebeeeeebbeebeeebeeeeebeebeeebebebbeebeebbeebeeebeeeeebeeebeeeeeeeeebb:    
Contact         :             b        b                   b   b    b   b  b       b   b                             

queryA       222:LRCWALGFYPAEITLTWQQDGEGHTQDTELVETRPAGDGTFQKWAAVVVPSGEEQRYTCHVQHEGLPEPVTLRWKP: 297
                :****************** ***  ************** **************************** * **** *:
4u1h_A_1     202:LRCWALGFYPAEITLTWQRDGEDQTQDTELVETRPAGDRTFQKWAAVVVPSGEEQRYTCHVQHEGLPKPLTLRWEP: 277
SecStr          :EEEEEEEEBSS  EEEEEETTEE GGG EE   EE SSS EEEEEEEEEETT GGGEEEEEE TT SS EEE    :    
ExpBur          :bbbbbeebbbbebebebbeeeeebeeebeeeeeeeeeeebbebbbbbebeeeebeebbbbbebeebeeeeebeeee:

Protein Model on 4u1h_A_1_C_1 (TEMPLATE: 4u1h )

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