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ALL MOLECULES IN THE BIOLOGICAL UNIT: |
MOLECULES | contact sites | |||||
model | mark | query | asym_id oper (auth_asym_id) |
type | description | a(query A) |
1 | a | A(HLAE_HUMAN) | A 1 (A) | polymer(polypeptide(L)) [274 aa] | HLA class I histocompatibility antigen, Cw-8 alpha chain :1C08_HUMAN | |
2 | b | C 1 (C) | polymer(polypeptide(L)) [9 aa] | Matrix protein 1 :D9J353_9INFA | 26L(M) 28Y 30H(Y) 84E 87S(K) 88A(Y) 91T(Q) 94I(T) 97V 98N(S) 101T(N) 105Y 116L 118W(R) 120H(Y) 137F 144Y 164S(T) 167K 168S(W) 173E(T) 176H(Q) 177Q(L) 180Y 188W 192Y (identity: 42.3 %/80.6 %) |
ALIGNMENTS |
MODEL[1] Protein A "queryA" TEMPLATE:4nt6_A_1 identity=80.6% |
queryA 23:SHSLKYFHTSVSRPGRGEPRFISVGYVDDTQFVRFDNDAASPRMVPRAPWMEQEGSEYWDRETRSARDTAQIFRVNLRTLRGYYNQSEAGSHTLQWMHGC: 122 :*** ** * ************ ********** ** ****** ***** **** ******* ** ** ** **************** * **: 4nt6_A_1 2:SHSMRYFYTAVSRPGRGEPRFIAVGYVDDTQFVQFDSDAASPRGEPRAPWVEQEGPEYWDRETQKYKRQAQTDRVSLRNLRGYYNQSEAGSHTLQRMYGC: 101 SecStr : EEEEEEEEEE TTSSS EEEEEEEETTEEEEEEETTSSS EE SHHHHTS HHHHHHHHHHHHHHHHHHHHHHHHHHHHTT TTS EEEEEEEE: ExpBur :ebbbebebebebbeeeeebebebbbebbebebbebbbeeeeeebeeebebbeebeeebbeebbeebeeebeebbeebebbeeeeeeeeeeebebebebbb: Contact : b b b b bb b b bb b b b b b queryA 123:ELGPDGRFLRGYEQFAYDGKDYLTLNEDLRSWTAVDTAAQISEQKSNDASEAEHQRAYLEDTCVEWLHKYLEKGKETLLHLEPPKTHVTHHPISDHEATL: 222 : ****** **** ********* ********** ****** * * ** ***** ****** *** ** ** * ********* *******: 4nt6_A_1 102:DLGPDGRLLRGYNQFAYDGKDYIALNEDLRSWTAADTAAQITQRKWEAARTAEQLRAYLEGTCVEWLRRYLENGKKTLQRAEHPKTHVTHHPVSDHEATL: 201 SecStr :EE TTS EEEEEEEEEETTEEEEEE TTSS EEESSHHHHHHHHHHHHHTHHHHHHHHHHTHHHHHHHHHHHHTHHHHS B EEEEEEEE SSSEEEE: ExpBur :bbbeeeeeeebbbebbbeeeebbbbeeebeebebeeebbeebeeebeeeeebeebeeebeeebbeebeebbeebeeebeeeeebeeebeeeeeeeeebbb: Contact : b b b bb b bb b b b queryA 223:RCWALGFYPAEITLTWQQDGEGHTQDTELVETRPAGDGTFQKWAAVVVPSGEEQRYTCHVQHEGLPEPVTLRW: 295 :***************** *** ********************************************* ****: 4nt6_A_1 202:RCWALGFYPAEITLTWQRDGEDQTQDTELVETRPAGDGTFQKWAAVVVPSGEEQRYTCHVQHEGLPEPLTLRW: 274 SecStr :EEEEEEEBSS EEEEEETTEE GGGEEE EE SSS EEEEEEEEEETT GGGEEEEEE TT SS EEE : ExpBur :bbbbeebbbbebebbbbeeeeebeeeeeebeeeeeeeebbebbbbbebeeeebeebbbbbebeebeeeeebee: |