Protein Model on 3lv3_A_1_C_1
(TEMPLATE: 
3lv3
)Protein Model on 3lv3_A_1_C_1
(TEMPLATE: 3lv3
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ALL MOLECULES IN THE BIOLOGICAL UNIT: |
| MOLECULES | contact sites | |||||
| model | mark | query | asym_id oper (auth_asym_id) |
type | description | a(query A) |
| 1 | a | A(HLAE_HUMAN) | A 1 (A) | polymer(polypeptide(L)) [276 aa] | HLA class I histocompatibility antigen, B-27 alpha chain :1B27_HUMAN | |
| 2 | b | C 1 (C) | polymer(polypeptide(L)) [9 aa] | 9-meric peptide from Voltage-dependent L-type calcium channel subunit alpha-1D :CAC1D_HUMAN | 28Y 30H 45S(T) 66M(E) 83R 84E 86R(Q) 87S(I) 88A(C) 90D(A) 94I(T) 95F(D) 97V(E) 98N(D) 101T 105Y 116L 118W(N) 120H(Y) 135E(H) 137F(D) 164S(T) 167K 168S(W) 173E(V) 176H(Q) 177Q(L) 180Y 184T(E) 188W 192Y (identity: 35.5 %/79.0 %) | |
| ALIGNMENTS |
| MODEL[1] Protein A "queryA" TEMPLATE:3lv3_A_1 identity=79.0% |
queryA 22:GSHSLKYFHTSVSRPGRGEPRFISVGYVDDTQFVRFDNDAASPRMVPRAPWMEQEGSEYWDRETRSARDTAQIFRVNLRTLRGYYNQSEAGSHTLQWMHG: 121
:**** ***************** ******* ***** ****** ***** **** ******* ** * **** ************* * *:
3lv3_A_1 1:GSHSMRYFHTSVSRPGRGEPRFITVGYVDDTLFVRFDSDAASPREEPRAPWIEQEGPEYWDRETQICKAKAQTDREDLRTLLRYYNQSEAGSHTLQNMYG: 100
SecStr : EEEEEEEEEE TTS S EEEEEEEETTEEEEEEETTSSS EE SGGGTTS HHHHHHHHHHHHHHHHHHHHHHHHHHHHTT SSS EEEEEEE:
ExpBur :eebbbbbebebebeeeeeebebebebebbebebbebbeeeeeeebeeebebbeebeeebbeebbeebeeebeebeeebebbbeeeeeeeeeebebebbeb:
Contact : b b b b bb bbb b bb bb b b b b b
queryA 122:CELGPDGRFLRGYEQFAYDGKDYLTLNEDLRSWTAVDTAAQISEQKSNDASEAEHQRAYLEDTCVEWLHKYLEKGKETLLHLEPPKTHVTHHPISDHEAT: 221
:* ***** **** * ******* ***** **** ****** * * ** ***** ***** *** ***** *****************:
3lv3_A_1 101:CDVGPDGRLLRGYHQDAYDGKDYIALNEDLSSWTAADTAAQITQRKWEAARVAEQLRAYLEGECVEWLRRYLENGKETLQRADPPKTHVTHHPISDHEAT: 200
SecStr :EEE TTS EEEEEEEEEETTEEEEEE TTSS EEE SHHHHHHHHHHHHTTHHHHHHHHHHTHHHHHHHHHHHHTHHHHTS B EEEEEEEESSSSEEE:
ExpBur :bebbeebeeeebbbebbbeeeebbebeeebeebeeeeebbeebbeeeeeeeebeebeebbeeebbeebeebbeebeeebeeeeebeeebbeeeeeeeebb:
Contact : b b b bb b bb b b b b
queryA 222:LRCWALGFYPAEITLTWQQDGEGHTQDTELVETRPAGDGTFQKWAAVVVPSGEEQRYTCHVQHEGLPEPVTLRWKP: 297
:****************** *** ************** **************************** * **** *:
3lv3_A_1 201:LRCWALGFYPAEITLTWQRDGEDQTQDTELVETRPAGDRTFQKWAAVVVPSGEEQRYTCHVQHEGLPKPLTLRWEP: 276
SecStr :EEEEEEEEBSS EEEEEETTEE TTT EE EE SSS EEEEEEEEEETT GGGEEEEEE TTSSS EEE :
ExpBur :bbbebeebbbbebebebbeeeeebeeeeeeeeeeeeeeebbebbbbbebeeeebeebbbbbebeebeeeeebeeee:
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[assembly_id:1]
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