Protein Model on 3ln4_A_1_C_1
(TEMPLATE: 
3ln4
)Protein Model on 3ln4_A_1_C_1
(TEMPLATE: 3ln4
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ALL MOLECULES IN THE BIOLOGICAL UNIT: |
| MOLECULES | contact sites | |||||
| model | mark | query | asym_id oper (auth_asym_id) |
type | description | a(query A) |
| 1 | a | A(HLAE_HUMAN) | A 1 (A) | polymer(polypeptide(L)) [274 aa] | HLA class I histocompatibility antigen, B-41 alpha chain :1B41_HUMAN | |
| 2 | b | C 1 (C) | polymer(polypeptide(L)) [8 aa] | 16-mer peptide from Heterogeneous nuclear ribonucleoproteins C1/C2 :HNRPC_HUMAN | 28Y 30H 45S(T) 66M(K) 83R 84E 87S(I) 88A(S) 94I(T) 97V(E) 98N(S) 101T(N) 105Y 116L 118W(R) 120H(Y) 137F(Y) 144Y 164S(T) 167K 168S(W) 173E(V) 176H(Q) 177Q(D) 180Y 188W 192Y (identity: 40.7 %/78.1 %) | |
| ALIGNMENTS |
| MODEL[1] Protein A "queryA" TEMPLATE:3ln4_A_1 identity=78.1% |
queryA 22:GSHSLKYFHTSVSRPGRGEPRFISVGYVDDTQFVRFDNDAASPRMVPRAPWMEQEGSEYWDRETRSARDTAQIFRVNLRTLRGYYNQSEAGSHTLQWMHG: 121
:**** **** *********** ******* ***** ** *** ***** **** ******* * * ** **************** * *:
3ln4_A_1 1:GSHSMRYFHTAMSRPGRGEPRFITVGYVDDTLFVRFDSDATSPRKEPRAPWIEQEGPEYWDRETQISKTNTQTYRESLRNLRGYYNQSEAGSHTLQRMYG: 100
SecStr : EEEEEEEEEE TTS S EEEEEEEETTEEEEEEETTSSS EE SGGGTTS HHHHHHHHHHHHHHHHHHHHHHHHHHHHTT TTS EEEEEEE:
ExpBur :eebebbbebbbebbeeeeebebebebebbebebbebebeeeeeebeeebebbeebeeebbeebbeebeebbeebbeebeebeeeeeeeeeeebebebebb:
Contact : b b b b bb bb b bb b b b b b
queryA 122:CELGPDGRFLRGYEQFAYDGKDYLTLNEDLRSWTAVDTAAQISEQKSNDASEAEHQRAYLEDTCVEWLHKYLEKGKETLLHLEPPKTHVTHHPISDHEAT: 221
:* ***** *** * ******* ********** ****** * * ** ***** ****** *** ** ** *****************:
3ln4_A_1 101:CDVGPDGRLLRGHNQYAYDGKDYIALNEDLRSWTAADTAAQITQRKWEAARVAEQDRAYLEGTCVEWLRRYLENGKDTLERADPPKTHVTHHPISDHEAT: 200
SecStr :EEE TT EEEEEEEEEETTEEEEEE TTSS EEESSHHHHHHHHHHHHTTHHHHHHHHHHTHHHHHHHHHHHHTHHHHT B EEEEEEEESSSSEEE:
ExpBur :bebbeebeeeebbbebbbeeeebbbbeeebeebeeeeebbeebbeeeeeeebbeebeeebeeebbeebeebbeebeeebeeebebeeebbeeeeeeeebb:
Contact : b b b bb b bb b b b
queryA 222:LRCWALGFYPAEITLTWQQDGEGHTQDTELVETRPAGDGTFQKWAAVVVPSGEEQRYTCHVQHEGLPEPVTLRW: 295
:****************** *** ************** **************************** * ****:
3ln4_A_1 201:LRCWALGFYPAEITLTWQRDGEDQTQDTELVETRPAGDRTFQKWAAVVVPSGEEQRYTCHVQHEGLPKPLTLRW: 274
SecStr :EEEEEEEEBSS EEEEEETTEE TTT EE EE SSS EEEEEEEEEETT GGGEEEEEE TT SS EEE :
ExpBur :bbbbbebbbbbebebebeeeeeebeeebeeeeeeeeeeebbebbbbbebeeeebeebbbbbebeebeeeeebee:
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[assembly_id:1]
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