Protein Model on 3jtt_A_1_C_1
(TEMPLATE: 
3jtt
)Protein Model on 3jtt_A_1_C_1
(TEMPLATE: 3jtt
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ALL MOLECULES IN THE BIOLOGICAL UNIT: |
| MOLECULES | contact sites | |||||
| model | mark | query | asym_id oper (auth_asym_id) |
type | description | a(query A) |
| 1 | a | A(HLAE_HUMAN) | A 1 (A) | polymer(polypeptide(L)) [276 aa] | MHC class I Mamu-A*02 :Q30597_MACMU | |
| 2 | b | C 1 (C) | polymer(polypeptide(L)) [9 aa] | peptide of Protein Nef :Q9WH73_SIVCZ | 26L(M) 28Y 30H(Y) 66M 80Y 83R 84E 87S(N) 88A(M) 90D(A) 91T(E) 94I(N) 97V 98N 101T(N) 102L 105Y 116L(I) 118W(R) 120H(Y) 137F(S) 144Y 164S(T) 167K 168S(W) 171A 173E 180Y 184T(E) 188W 192Y (identity: 51.6 %/77.5 %) | |
| ALIGNMENTS |
| MODEL[1] Protein A "queryA" TEMPLATE:3jtt_A_1 identity=77.5% |
queryA 22:GSHSLKYFHTSVSRPGRGEPRFISVGYVDDTQFVRFDNDAASPRMVPRAPWMEQEGSEYWDRETRSARDTAQIFRVNLRTLRGYYNQSEAGSHTLQWMHG: 121
:**** ** ** ***** ***** ************* **** ** ***** **** ******** * **** ************** * * *:
3jtt_A_1 1:GSHSMRYFYTSMSRPGRWEPRFIAVGYVDDTQFVRFDSDAASQRMEPRAPWVEQEGPEYWDRETRNMKAETQNAPVNLRNLRGYYNQSEAGSHTIQRMYG: 100
SecStr : EEEEEEEEEE SS EEEEEEEETTEEEEEEETTSSS S EE SHHHHS HHHHHHHHHHHHHHHHHHHHHHHHHHHHTT TTS EEEEEEE:
ExpBur :eebbbbbebebebbeeeeeeebebebebbeeebbebbbeeeeeebeeebebbeebeeebbeebbeebeebbeebeeebeebeeeeeeeeeeebebeebbb:
Contact : b b b b b bb bb bb b bb bb b b b b
queryA 122:CELGPDGRFLRGYEQFAYDGKDYLTLNEDLRSWTAVDTAAQISEQKSNDASEAEHQRAYLEDTCVEWLHKYLEKGKETLLHLEPPKTHVTHHPISDHEAT: 221
:* ****** **** * ******* ********** * *** * * *** * *** * *** *** ***** ********** ** ***:
3jtt_A_1 101:CDLGPDGRLLRGYHQSAYDGKDYIALNEDLRSWTAADMAAQNTQRKWEAAGEAEQHRTYLEGECLEWLRRYLENGKETLQRADPPKTHVTHHPVSDQEAT: 200
SecStr :EEE TTSSEEEEEEEEEETTEEEEEE TTSS EEESSTTHHHHHHHHHHTT STTTHHHHHTHHHHHHHHHHHHTHHHHT B EEEEEEEE SSSEEE:
ExpBur :bbbbeeeeeeebbbebbbeeeebbebeeebeebebeeebbeebbeeeeeeeebeebbeebebebbeebeebbeebeeebeeeeebeeebeeeeeeeeebb:
Contact : b b b bb b b b b b b
queryA 222:LRCWALGFYPAEITLTWQQDGEGHTQDTELVETRPAGDGTFQKWAAVVVPSGEEQRYTCHVQHEGLPEPVTLRWKP: 297
:****************** *** **************************** ************* ** **** *:
3jtt_A_1 201:LRCWALGFYPAEITLTWQRDGEDQTQDTELVETRPAGDGTFQKWAAVVVPSGKEQRYTCHVQHEGLREPLTLRWEP: 276
SecStr :EEEEEEEEBSS EEEEEETTEE GGGEEE EE SSS EEEEEEEEEESSGGGGEEEEEE TT SS EEE :
ExpBur :bbbbbeebbbbebebbbeeeeeebeeebeeeeeeeeeeebbebbbbbebeeeebeebbbbbebeeeeeeeebeeee:
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[assembly_id:1]
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