Protein Model on 3jts_A_1_C_1
(TEMPLATE: 
3jts
)Protein Model on 3jts_A_1_C_1
(TEMPLATE: 3jts
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ALL MOLECULES IN THE BIOLOGICAL UNIT: |
| MOLECULES | contact sites | |||||
| model | mark | query | asym_id oper (auth_asym_id) |
type | description | a(query A) |
| 1 | a | A(HLAE_HUMAN) | A 1 (A) | polymer(polypeptide(L)) [276 aa] | MHC class I Mamu-A*02 :Q30597_MACMU | |
| 2 | b | C 1 (C) | polymer(polypeptide(L)) [9 aa] | peptide of Gag-Pol polyprotein :POL_SIVSP | 26L(M) 28Y 30H(Y) 84E 87S(N) 91T(E) 94I(N) 98N 101T(N) 102L 105Y 116L(I) 118W(R) 120H(Y) 135E(H) 137F(S) 164S(T) 167K 168S(W) 173E 176H(Q) 177Q(H) 180Y 188W 192Y (identity: 40.0 %/77.5 %) | |
| ALIGNMENTS |
| MODEL[1] Protein A "queryA" TEMPLATE:3jts_A_1 identity=77.5% |
queryA 22:GSHSLKYFHTSVSRPGRGEPRFISVGYVDDTQFVRFDNDAASPRMVPRAPWMEQEGSEYWDRETRSARDTAQIFRVNLRTLRGYYNQSEAGSHTLQWMHG: 121
:**** ** ** ***** ***** ************* **** ** ***** **** ******** * **** ************** * * *:
3jts_A_1 1:GSHSMRYFYTSMSRPGRWEPRFIAVGYVDDTQFVRFDSDAASQRMEPRAPWVEQEGPEYWDRETRNMKAETQNAPVNLRNLRGYYNQSEAGSHTIQRMYG: 100
SecStr : EEEEEEEEEE TTSSS EEEEEEEETTEEEEEEETTSSS S EESSHHHHTS HHHHHHHHHHHHHHHHHHHHHHHHHHHHTT SSS EEEEEEE:
ExpBur :eebbbbbebebebbeeeeeeebebebebbebebbbbebeeeeeebeeebebbeebeeebbeebbeebeebbeebeeebeebeeeeeeeeeeebebebebb:
Contact : b b b b b b b b bb b b b b
queryA 122:CELGPDGRFLRGYEQFAYDGKDYLTLNEDLRSWTAVDTAAQISEQKSNDASEAEHQRAYLEDTCVEWLHKYLEKGKETLLHLEPPKTHVTHHPISDHEAT: 221
:* ****** **** * ******* ********** * *** * * *** * *** * *** *** ***** ********** ** ***:
3jts_A_1 101:CDLGPDGRLLRGYHQSAYDGKDYIALNEDLRSWTAADMAAQNTQRKWEAAGEAEQHRTYLEGECLEWLRRYLENGKETLQRADPPKTHVTHHPVSDQEAT: 200
SecStr :EEE SSSSEEEEEEEEEETTEEEEEE TTSSSEEESSSTTHHHHHHHHHTTHHHHHHHHHTTHHHHHHHHHHHHTHHHHT B EEEEEEEE SSSEEE:
ExpBur :bbbbeeeeeeebbbebbbeeeebbbbeeebeebeeeeebbeebbeebeeebebeebeebbeeebbebbeebbeebeeebeeeeebeeebeeeeeeeeebb:
Contact : b b b bb b bb b b b
queryA 222:LRCWALGFYPAEITLTWQQDGEGHTQDTELVETRPAGDGTFQKWAAVVVPSGEEQRYTCHVQHEGLPEPVTLRWKP: 297
:****************** *** **************************** ************* ** **** *:
3jts_A_1 201:LRCWALGFYPAEITLTWQRDGEDQTQDTELVETRPAGDGTFQKWAAVVVPSGKEQRYTCHVQHEGLREPLTLRWEP: 276
SecStr :EEEEEEEEBSS EEEEEBTTB GGGS EE EE SSS EEEEEEEEEETT GGG EEEEE TT SS EEE :
ExpBur :bbbbbebbbbbebebebeeeeeebeeeeeeeeeeeeeeebbebbbbbebeeeebeebebebebeeeeeeeebeeee:
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[assembly_id:1]
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