Protein Model on 3dtx_A_1_C_1 (TEMPLATE: 3dtx )

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ALL MOLECULES IN THE BIOLOGICAL UNIT:
[assembly_id:1] [assembly_id:2]

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MOLECULES contact sites
model mark query asym_id oper
(auth_asym_id)
type description a(query A)
1 a A(HLAE_HUMAN) A 1 (A) polymer(polypeptide(L)) [276 aa] MHC class I antigen (Fragment) :A3F718_HUMAN
2 b C 1 (C) polymer(polypeptide(L)) [9 aa] Double citrullinated vasoactive intestinal polypeptide receptor 28Y 30H 45S(T) 66M(E) 80Y 83R 84E 86R(Q) 87S(I) 88A(C) 90D(A) 91T(K) 94I(T) 98N(D) 101T 102L 105Y 120H(Y) 135E(H) 137F(D) 144Y 164S(T) 167K 168S(W) 173E(V) 176H(Q) 177Q(L) 180Y 184T(E) 188W 192Y (identity: 41.9 %/79.0 %)
ALIGNMENTS
MODEL[1] Protein A "queryA" TEMPLATE:3dtx_A_1 identity=79.0%
queryA        22:GSHSLKYFHTSVSRPGRGEPRFISVGYVDDTQFVRFDNDAASPRMVPRAPWMEQEGSEYWDRETRSARDTAQIFRVNLRTLRGYYNQSEAGSHTLQWMHG: 121
                :****  ***************** ******* ***** ******  ***** **** *******      **  *  ****  ************* * *:
3dtx_A_1       1:GSHSMRYFHTSVSRPGRGEPRFITVGYVDDTLFVRFDSDAASPREEPRAPWIEQEGPEYWDRETQICKAKAQTDREDLRTLLRYYNQSEAGSHTLQNMYG: 100
SecStr          :  EEEEEEEEEE  TTS S EEEEEEEETTEEEEEEETTSSS   EE STTTTTS HHHHHHHHHHHHHHHHHHHHHHHHHHHHTT  SSS  EEEEEEE:    
ExpBur          :eebebbbebebebbeeeeebebebebebbebebbebbeeeeeeebeeebebbeebeeebbeebbeebeebbeebeeebebbbeeeeeeeeeebebebbeb:    
Contact         :      b b              b                    b             b  bb bbb bb  b   b  bb  b              b 

queryA       122:CELGPDGRFLRGYEQFAYDGKDYLTLNEDLRSWTAVDTAAQISEQKSNDASEAEHQRAYLEDTCVEWLHKYLEKGKETLLHLEPPKTHVTHHPISDHEAT: 221
                :*  ***** **** * *******  ***** **** ******   *   *  **  *****  *****  *** *****    *****************:
3dtx_A_1     101:CDVGPDGRLLRGYHQDAYDGKDYIALNEDLSSWTAADTAAQITQRKWEAARVAEQLRAYLEGECVEWLRRYLENGKETLQRADPPKTHVTHHPISDHEAT: 200
SecStr          :EEE TT  EEEEEEEEEETTEEEEEE TTSS EEESSHHHHHHHHHHHHTTHHHHHHHHHHTHHHHHHHHHHHHTHHHHT  B  EEEEEEEE SSSEEE:    
ExpBur          :bbbbeebeeeebbbebbbeeeebbebeeebeebebeeebbeebeeeeeeeebbeebeeebebebbeebeebbeebeebbeeebebeeebeeeeeeeeebb:    
Contact         :             b b      b                   b  bb    b  bb  b   b   b   b                             

queryA       222:LRCWALGFYPAEITLTWQQDGEGHTQDTELVETRPAGDGTFQKWAAVVVPSGEEQRYTCHVQHEGLPEPVTLRWKP: 297
                :****************** ***  ************** **************************** * **** *:
3dtx_A_1     201:LRCWALGFYPAEITLTWQRDGEDQTQDTELVETRPAGDRTFQKWAAVVVPSGEEQRYTCHVQHEGLPKPLTLRWEP: 276
SecStr          :EEEEEEEEBSS  EEEEEETTEE TTT EE   EE SSS EEEEEEEEEETT GGGEEEEEE TT SS EEE    :    
ExpBur          :bbbebebbbbbebebebeeeeeebeeebeeeeeeeeeeebbebbbbbebeeeebeebbbbbebeebeeeeebeeee:    


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