Protein Model on 3bw9_A_1_C_1
(TEMPLATE: 
3bw9
)Protein Model on 3bw9_A_1_C_1
(TEMPLATE: 3bw9
)| CurrentView:HTML5 Change to:[JAVA] |
DOWNLOAD: [sequence-replaced 3D model]
[for PyMOL] [3D template] [Modeller script]
ALL MOLECULES IN THE BIOLOGICAL UNIT: |
| MOLECULES | contact sites | |||||
| model | mark | query | asym_id oper (auth_asym_id) |
type | description | a(query A) |
| 1 | a | A(HLAE_HUMAN) | A 1 (A) | polymer(polypeptide(L)) [276 aa] | HLA class I histocompatibility antigen, B-35 alpha chain :1B35_HUMAN | |
| 2 | b | C 1 (C) | polymer(polypeptide(L)) [12 aa] | CPS peptide from 65 kDa lower matrix phosphoprotein :PP65_HCMVA | 26L(M) 28Y 30H(Y) 83R 84E(N) 86R(Q) 87S(I) 88A(F) 90D(T) 94I(T) 95F(Y) 97V(E) 98N(S) 101T(N) 102L 105Y 116L(I) 118W(R) 120H(Y) 137F(S) 144Y 164S(T) 167K 168S(W) 171A 173E(V) 176H(Q) 177Q(R) 180Y 188W 192Y (identity: 32.3 %/76.8 %) | |
| ALIGNMENTS |
| MODEL[1] Protein A "queryA" TEMPLATE:3bw9_A_1 identity=76.8% |
queryA 22:GSHSLKYFHTSVSRPGRGEPRFISVGYVDDTQFVRFDNDAASPRMVPRAPWMEQEGSEYWDRETRSARDTAQIFRVNLRTLRGYYNQSEAGSHTLQWMHG: 121
:**** ** * *********** ************* ****** ***** **** ***** * * * ** ************* * * *:
3bw9_A_1 1:GSHSMRYFYTAMSRPGRGEPRFIAVGYVDDTQFVRFDSDAASPRTEPRAPWIEQEGPEYWDRNTQIFKTNTQTYRESLRNLRGYYNQSEAGSHIIQRMYG: 100
SecStr : EEEEEEEEEE TTSSS EEEEEEEETTEEEEEEETTSSS EE SGGGTTS HHHHHHHHHHHHHHHHHHHHHHHHHHHHTT SSS EEEEEEE:
ExpBur :eebebbbebebbbbeeeeebebebebebbebebbebebeeeeeebbeebebbeebeeebbeebbeebeebbeebbeebeebeeeeeeeeeeebebebbbb:
Contact : b b b bb bbb b bb bb bb b b b b
queryA 122:CELGPDGRFLRGYEQFAYDGKDYLTLNEDLRSWTAVDTAAQISEQKSNDASEAEHQRAYLEDTCVEWLHKYLEKGKETLLHLEPPKTHVTHHPISDHEAT: 221
:* ****** *** * ******* ***** **** ****** * * ** ***** ***** *** ***** ********** ******:
3bw9_A_1 101:CDLGPDGRLLRGHDQSAYDGKDYIALNEDLSSWTAADTAAQITQRKWEAARVAEQRRAYLEGLCVEWLRRYLENGKETLQRADPPKTHVTHHPVSDHEAT: 200
SecStr :EEE TTS EEEEEEEEEETTEEEEEE TTSS EEESSHHHHHHHHHHHHTTHHHHHHHHHHTHHHHHHHHHHHHTHHHHT B EEEEEEEEEETTEEE:
ExpBur :bbbbeeeeeeebbbebbbeeeebbbbeeebeebebeeebbeebeeeeeeeeebeebeeebebebbebbeebbeebeeebeeebebeeebeeeeeeeeebb:
Contact : b b b bb b b bb b b b
queryA 222:LRCWALGFYPAEITLTWQQDGEGHTQDTELVETRPAGDGTFQKWAAVVVPSGEEQRYTCHVQHEGLPEPVTLRWKP: 297
:****************** *** ************** **************************** * **** *:
3bw9_A_1 201:LRCWALGFYPAEITLTWQRDGEDQTQDTELVETRPAGDRTFQKWAAVVVPSGEEQRYTCHVQHEGLPKPLTLRWEP: 276
SecStr :EEEEEEEEBSS EEEEEETTEE TTT EE EE SSS EEEEEEEEEETT GGGEEEEEE TT SS EEE :
ExpBur :bbbbbeebbbbebebebeeeeeebeeebeeeeeeeeeeebbebbbbbebeeeebeebbbbbebeebeeeeebeeee:
|
[assembly_id:1]
[help]