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DOWNLOAD: [sequence-replaced 3D model] [for PyMOL] [3D template] [Modeller script]
ALL MOLECULES IN THE BIOLOGICAL UNIT: |
MOLECULES | contact sites | |||||
model | mark | query | asym_id oper (auth_asym_id) |
type | description | a(query A) |
1 | a | A(HLAE_HUMAN) | A 1 (A) | polymer(polypeptide(L)) [275 aa] | HLA CLASS I HISTOCOMPATIBILITY ANTIGEN, B-57 ALPHA CHAIN :1B57_HUMAN | |
2 | b | C 1 (C) | polymer(polypeptide(L)) [9 aa] | HIV-P24 | 26L(M) 28Y 30H(Y) 84E 87S(N) 88A(M) 91T(S) 94I(T) 95F(Y) 98N 101T(I) 105Y 120H(Y) 137F(Y) 164S(T) 167K 168S(W) 173E(V) 176H(Q) 177Q(L) 180Y 188W 192Y (identity: 34.8 %/77.1 %) |
ALIGNMENTS |
MODEL[1] Protein A "queryA" TEMPLATE:2bvq_A_1 identity=77.1% |
queryA 22:GSHSLKYFHTSVSRPGRGEPRFISVGYVDDTQFVRFDNDAASPRMVPRAPWMEQEGSEYWDRETRSARDTAQIFRVNLRTLRGYYNQSEAGSHTLQWMHG: 121 :**** ** * *********** ************* ******* ***** **** **** *** ** * *** ********** * * *: 2bvq_A_1 1:GSHSMRYFYTAMSRPGRGEPRFIAVGYVDDTQFVRFDSDAASPRMAPRAPWIEQEGPEYWDGETRNMKASAQTYRENLRIALRYYNQSEAGSHIIQVMYG: 100 SecStr : EEEEEEEEEE TTS S EEEEEEEETTEEEEEEETTSSS EE SGGGTTS HHHHHHHHHHHHHHHHHHHHHHHHHHHHHT TTS EEEEEEE: ExpBur :eebbbbbebebebbeeeeebebebbbebeebebbebeeeeeeeebbeebebbeebeeebbeeebeebeebbeebbeebebbbebeeeeeeeebebebebb: Contact : b b b b bb b bb b b b b queryA 122:CELGPDGRFLRGYEQFAYDGKDYLTLNEDLRSWTAVDTAAQISEQKSNDASEAEHQRAYLEDTCVEWLHKYLEKGKETLLHLEPPKTHVTHHPISDHEAT: 221 :* ***** *** * ******* ***** **** ****** * * ** ***** ***** *** ***** *****************: 2bvq_A_1 101:CDVGPDGRLLRGHNQYAYDGKDYIALNEDLSSWTAADTAAQITQRKWEAARVAEQLRAYLEGLCVEWLRRYLENGKETLQRADPPKTHVTHHPISDHEAT: 200 SecStr :EEE TTS EEEEEEEEEETTEEEEEE TTSS EEESSHHHHHHHHHHHHTTHHHHHHHHHHTHHHHHHHHHHHHTHHHHT B EEEEEEEE SSSEEE: ExpBur :bbbbeebeeeebbbebbbeeeebbbbeeebeebebeeebbeebeeebeeeeebeeeeeebebebbeebeebbeebeeebeeeeebeeebeeeeeeeeebb: Contact : b b bb b bb b b b queryA 222:LRCWALGFYPAEITLTWQQDGEGHTQDTELVETRPAGDGTFQKWAAVVVPSGEEQRYTCHVQHEGLPEPVTLRWK: 296 :****************** *** ************** **************************** * **** : 2bvq_A_1 201:LRCWALGFYPAEITLTWQRDGEDQTQDTELVETRPAGDRTFQKWAAVVVPSGEEQRYTCHVQHEGLPKPLTLRWE: 275 SecStr :EEEEEEEEBSS EEEEEETTEE GGG EE EE SSS EEEEEEEEEETT GGGEEEEEE TT SS EEE -: ExpBur :bbbbbebbbbbebebebeeeeeebeeebeeeeeeeeeeebbebbbbbebeeeebeebbbbbebeebeeeeebee-: |