[pdbjlvh2]Protein Model on 2bvp_A_1_C

Protein Model on 2bvp_A_1_C_1 (TEMPLATE: 2bvp )

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ALL MOLECULES IN THE BIOLOGICAL UNIT:
[assembly_id:1]

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MOLECULES						contact sites
model	mark	query	asym_id oper (auth_asym_id)	type	description	a(query A)
1	a	A(HLAE_HUMAN)	A 1 (A)	polymer(polypeptide(L)) [274 aa]	HLA CLASS I HISTOCOMPATIBILITY ANTIGEN, B-57 ALPHA CHAIN :1B57_HUMAN
2	b		C 1 (C)	polymer(polypeptide(L)) [9 aa]	HIV-P24	26L(M) 28Y 30H(Y) 83R(G) 84E 87S(N) 88A(M) 90D(A) 91T(S) 94I(T) 98N 101T(I) 105Y 116L(I) 120H(Y) 137F(Y) 138A 144Y 164S(T) 167K 168S(W) 173E(V) 176H(Q) 177Q(L) 180Y 188W 192Y (identity: 37.0 %/77.4 %)

ALIGNMENTS

MODEL[1] Protein A "queryA" TEMPLATE:2bvp_A_1 identity=77.4%

queryA        22:GSHSLKYFHTSVSRPGRGEPRFISVGYVDDTQFVRFDNDAASPRMVPRAPWMEQEGSEYWDRETRSARDTAQIFRVNLRTLRGYYNQSEAGSHTLQWMHG: 121
                :****  ** *  *********** ************* ******* ***** **** **** ***     **  * ***    **********  * * *:
2bvp_A_1       1:GSHSMRYFYTAMSRPGRGEPRFIAVGYVDDTQFVRFDSDAASPRMAPRAPWIEQEGPEYWDGETRNMKASAQTYRENLRIALRYYNQSEAGSHIIQVMYG: 100
SecStr          :  EEEEEEEEEE  TTSSS EEEEEEEETTEEEEEEETTSSS   EE SGGGTTS HHHHHHHHHHHHHHHHHHHHHHHHHHHHTT  TTS  EEEEEEE:    
ExpBur          :eebbbbbebebebbeeeeebebebbbebbebebbebebeeeeeebbeebebbeebeeebbeeebeebeebbeebbeebebbbebeeeeeeeebebebbbb:    
Contact         :    b b b                                                    bb  bb bb  b   b  b   b          b   b 

queryA       122:CELGPDGRFLRGYEQFAYDGKDYLTLNEDLRSWTAVDTAAQISEQKSNDASEAEHQRAYLEDTCVEWLHKYLEKGKETLLHLEPPKTHVTHHPISDHEAT: 221
                :*  ***** ***  * *******  ***** **** ******   *   *  **  *****  *****  *** *****    *****************:
2bvp_A_1     101:CDVGPDGRLLRGHNQYAYDGKDYIALNEDLSSWTAADTAAQITQRKWEAARVAEQLRAYLEGLCVEWLRRYLENGKETLQRADPPKTHVTHHPISDHEAT: 200
SecStr          :EEE TT  EEEEEEEEEETTEEEEEE TTSS EEESSHHHHHHHHHHHHTTHHHHHHHHHHTHHHHHHHHHHHHTHHHHT  B  EEEEEEEEEETTEEE:    
ExpBur          :bbbbeebeeeebbbebbbeeeebbbbeeebeebebeeebbeebeeeeeeeebbeebeeebebebbeebeebbeebeebbeeebebeeebbeeeeeeeebb:    
Contact         :               bb     b                   b  bb    b  bb  b       b   b                             

queryA       222:LRCWALGFYPAEITLTWQQDGEGHTQDTELVETRPAGDGTFQKWAAVVVPSGEEQRYTCHVQHEGLPEPVTLRW: 295
                :****************** ***  ************** **************************** * ****:
2bvp_A_1     201:LRCWALGFYPAEITLTWQRDGEDQTQDTELVETRPAGDRTFQKWAAVVVPSGEEQRYTCHVQHEGLPKPLTLRW: 274
SecStr          :EEEEEEEEBSS  EEEEEETTEE GGG EE   EE SSS EEEEEEEEEETT GGGEEEEEE TTSSS EEE  :    
ExpBur          :bbbbbebbbbbebebebeeeeeebeeebeeeebeeeeeebbebbbbbebeeeebeebbbbbebeebeeeeebee:

Protein Model on 2bvp_A_1_C_1 (TEMPLATE: 2bvp )

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