[pdbjlvh2]Protein Model on 1zvs_A_1_C

Protein Model on 1zvs_A_1_C_1 (TEMPLATE: 1zvs )

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ALL MOLECULES IN THE BIOLOGICAL UNIT:
[assembly_id:1]

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MOLECULES						contact sites
model	mark	query	asym_id oper (auth_asym_id)	type	description	a(query A)
1	a	A(HLAE_HUMAN)	A 1 (A)	polymer(polypeptide(L)) [278 aa]	MHC class I antigen
2	b		C 1 (C)	polymer(polypeptide(L)) [8 aa]	Tat-Tl8	26L(M) 28Y 30H(Y) 66M 80Y 83R 84E 87S(N) 88A(M) 91T(E) 94I(N) 98N 101T 102L 105Y 116L 118W(R) 120H(V) 144Y 164S(T) 167K 168S(W) 173E(V) 176H(S) 177Q(M) 180Y 184T(Q) 188W 192Y (identity: 51.7 %/79.3 %)

ALIGNMENTS

MODEL[1] Protein A "queryA" TEMPLATE:1zvs_A_1 identity=79.3%

queryA        22:GSHSLKYFHTSVSRPGRGEPRFISVGYVDDTQFVRFDNDAASPRMVPRAPWMEQEGSEYWDRETRSARDTAQIFRVNLRTLRGYYNQSEAGSHTLQWMHG: 121
                :**** *** ** ****** **** ************* **** ** ***** **** ********      *   ******  ************* * *:
1zvs_A_1       1:GSHSMKYFYTSMSRPGRGQPRFIAVGYVDDTQFVRFDSDAASQRMEPRAPWVEQEGPEYWDRETRNMKTETQNAPVNLRTLLRYYNQSEAGSHTLQRMVG: 100
SecStr          :   EEEEEEEEE  TTS S EEEEEEEETTEEEEEEETTSSS S EE SHHHHTS HHHHHHHHHHHHHHHHHHHHHHHHHHHHTT  SSS  EEEEEEE:    
ExpBur          :eebbbbbebebebbeeeeebebebebebbeeebbebbbeeeeeebeeebebbeebeeebbeebbeebeebbeebbeebebbbebeeeeeeeebebebbbb:    
Contact         :    b b b                                   b             b  bb  bb  b  b   b  bb  b          b b b 

queryA       122:CELGPDGRFLRGYEQFAYDGKDYLTLNEDLRSWTAVDTAAQISEQKSNDASEAEHQRAYLEDTCVEWLHKYLEKGKETLLHLEPPKTHVTHHPISDHEAT: 221
                :* ****** ****** *******  ********** * ***    *   *  **  *****  *****  *********    ********** ******:
1zvs_A_1     101:CDLGPDGRLLRGYEQYAYDGKDYIALNEDLRSWTAADVAAQNTQRKWEAADVAESMRAYLEGQCVEWLPRYLEKGKETLQRTDPPKTHVTHHPVSDHEAT: 200
SecStr          :EEE SSSSEEEEEEEEEETTEEEEEE TTSS EEESSHHHHHHHHHHHHTTHHHHHHHHHHTHHHHHHHHHHHHTHHHHT  B  EEEEEEEE SSSEEE:    
ExpBur          :bebbeeeeeeebbbebbbeeeebbebeeebeebebeeebbeebeeebeeeebbeebeeebebebbebbeebbeebeeebeeeeebeeebbeeeeeeeebb:    
Contact         :                      b                   b  bb    b  bb  b   b   b   b                             

queryA       222:LRCWALGFYPAEITLTWQQDGEGHTQDTELVETRPAGDGTFQKWAAVVVPSGEEQRYTCHVQHEGLPEPVTLRWKP: 297
                :****************** ***  ******************************************* * ** * *:
1zvs_A_1     201:LRCWALGFYPAEITLTWQRDGEDQTQDTELVETRPAGDGTFQKWAAVVVPSGEEQRYTCHVQHEGLPKPHTLKWEP: 276
SecStr          :EEEEEEEEBSS  EEEEEESS B TTTEEE   EE SSS EEEEEEEEEETTGGGGEEEEEE TT SS EEE    :    
ExpBur          :bbbebeebbbbebebbbeeeeeebeeebeeeeeeeeeeebbebbbbbebeeeebeebebbbebeebeeeeebebee:

Protein Model on 1zvs_A_1_C_1 (TEMPLATE: 1zvs )

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