CurrentView:HTML5 Change to:[JAVA] |
DOWNLOAD: [sequence-replaced 3D model] [for PyMOL] [3D template] [Modeller script]
ALL MOLECULES IN THE BIOLOGICAL UNIT: |
MOLECULES | contact sites | |||||
model | mark | query | asym_id oper (auth_asym_id) |
type | description | a(query A) |
1 | a | A(HLAE_HUMAN) | A 1 (A) | polymer(polypeptide(L)) [273 aa] | HISTOCOMPATIBILITY LEUKOCYTE ANTIGEN (HLA)-CW4 (HEAVY CHAIN) :1C04_HUMAN | |
2 | b | C 1 (C) | polymer(polypeptide(L)) [9 aa] | HLA-CW4 SPECIFIC PEPTIDE | 28Y 43F 80Y 84E 87S(K) 88A(Y) 90D(R) 91T(Q) 94I(A) 95F(D) 98N 101T(K) 102L 105Y 116L 118W(R) 120H(F) 137F 164S(T) 167K 168S(W) 176H(Q) 177Q(R) 180Y 184T 188W 192Y (identity: 51.9 %/81.3 %) |
ALIGNMENTS |
MODEL[1] Protein A "queryA" TEMPLATE:1qqd_A_1 identity=81.3% |
queryA 23:SHSLKYFHTSVSRPGRGEPRFISVGYVDDTQFVRFDNDAASPRMVPRAPWMEQEGSEYWDRETRSARDTAQIFRVNLRTLRGYYNQSEAGSHTLQWMHGC: 122 :*** ** **** ********* ************* ****** ** ** **** ******* ** ***** ********* ****** * **: 1qqd_A_1 1:SHSMRYFSTSVSWPGRGEPRFIAVGYVDDTQFVRFDSDAASPRGEPREPWVEQEGPEYWDRETQKYKRQAQADRVNLRKLRGYYNQSEDGSHTLQRMFGC: 100 SecStr : EEEEEEEEEEE TT SS EEEEEEEETTEEEEEEESSSSS EESSHHHHTS HHHHHHHHHHHHHHHHHHHHHHHHHHHHTT SSS EEEEEEEEE: ExpBur :eebbebebebbbeeeeeebebebebebeebebbebebeeeeeebeeeeebbeebeeebbeebbeebeeebeebeeebeebbeeeeeeeeeebebebbbbb: Contact : b b b b bb bb bb b bb b b b b queryA 123:ELGPDGRFLRGYEQFAYDGKDYLTLNEDLRSWTAVDTAAQISEQKSNDASEAEHQRAYLEDTCVEWLHKYLEKGKETLLHLEPPKTHVTHHPISDHEATL: 222 : ****** **** ********* ********** ****** * * *** ***** ****** *** ***** * ********* *******: 1qqd_A_1 101:DLGPDGRLLRGYNQFAYDGKDYIALNEDLRSWTAADTAAQITQRKWEAAREAEQRRAYLEGTCVEWLRRYLENGKETLQRAEHPKTHVTHHPVSDHEATL: 200 SecStr :EE SSSSEEEEEEEEEETTEEEEEE TTSS EEESSHHHHHHHHHHHHTTHHHHHHHHHHTHHHHHHHHHHHHTHHHHT EEEEEEEE SSS EEE: ExpBur :ebeeeeeeeebbbebbbeeeebbebeeebeebeeeeebbeebbeeeeeeebbeeeeeebeeebbeebeebbeebeeebeeeeebeeebeeeeeeeeebbb: Contact : b b bb bb b b b b queryA 223:RCWALGFYPAEITLTWQQDGEGHTQDTELVETRPAGDGTFQKWAAVVVPSGEEQRYTCHVQHEGLPEPVTLRW: 295 :***************** *** ********************************************* ****: 1qqd_A_1 201:RCWALGFYPAEITLTWQWDGEDQTQDTELVETRPAGDGTFQKWAAVVVPSGEEQRYTCHVQHEGLPEPLTLRW: 273 SecStr :EEEEEEESSS EEEEEETTEE GGG EE EE SSS EEEEEEEEE TT GGGEEEEEE TT SS EEE : ExpBur :bbebeebbbbebebbbeeeeeebeeeeeebeeeeeeeebbebbbbbebeeeebeebbbebebebbeeeeebee: |