Protein Model on 1ogt_A_1_C_1
(TEMPLATE: 
1ogt
)Protein Model on 1ogt_A_1_C_1
(TEMPLATE: 1ogt
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ALL MOLECULES IN THE BIOLOGICAL UNIT: |
| MOLECULES | contact sites | |||||
| model | mark | query | asym_id oper (auth_asym_id) |
type | description | a(query A) |
| 1 | a | A(HLAE_HUMAN) | A 1 (A) | polymer(polypeptide(L)) [276 aa] | HLA CLASS I HISTOCOMPATIBILITY ANTIGEN :1B18_HUMAN | |
| 2 | b | C 1 (C) | polymer(polypeptide(L)) [9 aa] | VASOACTIVE INTESTINAL POLYPEPTIDE RECEPTOR 1 :VIPR_HUMAN | 28Y 30H 45S(T) 66M(E) 80Y 83R 84E 87S(I) 88A(C) 90D(A) 91T(K) 94I(T) 97V(E) 98N(D) 101T 102L 105Y 116L 120H(Y) 135E(H) 164S(T) 167K 168S(W) 173E(V) 176H(Q) 177Q(L) 180Y 184T(E) 188W 192Y (identity: 43.3 %/79.0 %) | |
| ALIGNMENTS |
| MODEL[1] Protein A "queryA" TEMPLATE:1ogt_A_1 identity=79.0% |
queryA 22:GSHSLKYFHTSVSRPGRGEPRFISVGYVDDTQFVRFDNDAASPRMVPRAPWMEQEGSEYWDRETRSARDTAQIFRVNLRTLRGYYNQSEAGSHTLQWMHG: 121
:**** ***************** ******* ***** ****** ***** **** ******* ** * **** ************* * *:
1ogt_A_1 1:GSHSMRYFHTSVSRPGRGEPRFITVGYVDDTLFVRFDSDAASPREEPRAPWIEQEGPEYWDRETQICKAKAQTDREDLRTLLRYYNQSEAGSHTLQNMYG: 100
SecStr : EEEEEEEEEE TTSSS EEEEEEEETTEEEEEEETTSSS EE SGGGTTS HHHHHHHHHHHHHHHHHHHHHHHHHHHHTT SSS EEEEEEE:
ExpBur :eebebbbebebebbeeeeebebebebebbebebbebbeeeeebebeeebebbeebeeebbeebbeebeebbeebeeebebbbeeeeeeeeeebebebbeb:
Contact : b b b b b bb bb bb b bb bb b b b
queryA 122:CELGPDGRFLRGYEQFAYDGKDYLTLNEDLRSWTAVDTAAQISEQKSNDASEAEHQRAYLEDTCVEWLHKYLEKGKETLLHLEPPKTHVTHHPISDHEAT: 221
:* ***** **** * ******* ***** **** ****** * * ** ***** ***** *** ***** *****************:
1ogt_A_1 101:CDVGPDGRLLRGYHQDAYDGKDYIALNEDLSSWTAADTAAQITQRKWEAARVAEQLRAYLEGECVEWLRRYLENGKETLQRADPPKTHVTHHPISDHEAT: 200
SecStr :EEE TTS EEEEEEEEEETTEEEEEE TTSS EEESSHHHHHHHHHHHHTTHHHHHHHHHHTHHHHHHHHHHHHTHHHHT B EEEEEEEESSSSEEE:
ExpBur :bbbbeebeeeebbbebbbeeeebbebeeebeebebeeebbeebeeeeeeeebbeebeeebebebbeebeebbeebeebbeeebebeeebbeeeeeeeebb:
Contact : b b bb b bb b b b b
queryA 222:LRCWALGFYPAEITLTWQQDGEGHTQDTELVETRPAGDGTFQKWAAVVVPSGEEQRYTCHVQHEGLPEPVTLRWKP: 297
:****************** *** ************** **************************** * **** *:
1ogt_A_1 201:LRCWALGFYPAEITLTWQRDGEDQTQDTELVETRPAGDRTFQKWAAVVVPSGEEQRYTCHVQHEGLPKPLTLRWEP: 276
SecStr :EEEEEEEEBSS EEEEEETTEE GGG EE EE SSS EEEEEEEEEETT GGGEEEEEE TTSSS EEE :
ExpBur :bbbbbebbbbbebebbbeeeeeebeeebeeeeeeeeeeebbebbbbbebeeeebeebbbbbebeebeeeeebeeee:
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[assembly_id:1]
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