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DOWNLOAD: [sequence-replaced 3D model] [for PyMOL] [3D template] [Modeller script]
ALL MOLECULES IN THE BIOLOGICAL UNIT: |
MOLECULES | contact sites | |||||
model | mark | query | asym_id oper (auth_asym_id) |
type | description | a(query A) |
1 | a | A(HLAE_HUMAN) | A 1 (A) | polymer(polypeptide(L)) [276 aa] | B*0801 :1B08_HUMAN | |
2 | b | C 1 (C) | polymer(polypeptide(L)) [8 aa] | HIV-1 GAG PEPTIDE (GGKKKYQL - 7Q MUTATION) | 28Y 30H(D) 84E(N) 87S(I) 91T(N) 94I(T) 95F(D) 97V(E) 98N(S) 101T(N) 102L 105Y 116L 118W(S) 120H(Y) 135E(N) 137F(Y) 144Y 164S(T) 167K 168S(W) 173E(V) 176H(Q) 177Q(D) 180Y 188W 192Y (identity: 33.3 %/78.3 %) |
ALIGNMENTS |
MODEL[1] Protein A "queryA" TEMPLATE:1agc_A_1 identity=78.3% |
queryA 22:GSHSLKYFHTSVSRPGRGEPRFISVGYVDDTQFVRFDNDAASPRMVPRAPWMEQEGSEYWDRETRSARDTAQIFRVNLRTLRGYYNQSEAGSHTLQWMHG: 121 :**** ** * ************************* ****** ***** **** ***** * * * ** **************** * *: 1agc_A_1 1:GSHSMRYFDTAMSRPGRGEPRFISVGYVDDTQFVRFDSDAASPREEPRAPWIEQEGPEYWDRNTQIFKTNTQTDRESLRNLRGYYNQSEAGSHTLQSMYG: 100 SecStr : EEEEEEEEEE TTS S EEEEEEEETTEEEEEEETTSSS EESSGGGTTS HHHHHHHHHHHHHHHHHHHHHHHHHHHHTT TTS EEEEEEE: ExpBur :eebebbbebebebbeeeeebebbbbbebbebebbebbbebeeeebbeebebbeebeeebbeebbeebeeebeebbeebeebeeeeeeeeeeebebebebb: Contact : b b b b b bb bb bb b b b b queryA 122:CELGPDGRFLRGYEQFAYDGKDYLTLNEDLRSWTAVDTAAQISEQKSNDASEAEHQRAYLEDTCVEWLHKYLEKGKETLLHLEPPKTHVTHHPISDHEAT: 221 :* ***** *** * ******* ********** ****** * * ** ***** ****** *** ** ** *****************: 1agc_A_1 101:CDVGPDGRLLRGHNQYAYDGKDYIALNEDLRSWTAADTAAQITQRKWEAARVAEQDRAYLEGTCVEWLRRYLENGKDTLERADPPKTHVTHHPISDHEAT: 200 SecStr :EEE TT EEEEEEEEEETTEEEEEE TTSS EEESSHHHHHHHHHHHHHTHHHHHHHHHHTHHHHHHHHHHHHTHHHHT B EEEEEEEE SSSEEE: ExpBur :bbbbeebeeeebbbeebbeeeebbbbeeebeebeeeeebbeebeeeeeeeeebeeeeeebebebbeebeebbeebeeebeeebebeeebeeeeeeeeebb: Contact : b b b b bb b bb b b b queryA 222:LRCWALGFYPAEITLTWQQDGEGHTQDTELVETRPAGDGTFQKWAAVVVPSGEEQRYTCHVQHEGLPEPVTLRWKP: 297 :****************** *** ************** **************************** * **** *: 1agc_A_1 201:LRCWALGFYPAEITLTWQRDGEDQTQDTELVETRPAGDRTFQKWAAVVVPSGEEQRYTCHVQHEGLPKPLTLRWEP: 276 SecStr :EEEEEEEEBSS EEEEEETTEE TTT EE EE SSS EEEEEEEEEETT GGGEEEEEE TT SS EEE : ExpBur :bbbbbebbbbbebebebbeeeeebeeebeeeeeeeeeeebbebbbbbebeeeebeebbbbbebeebeeeeebeeee: |