Protein Model on 8e8i_A_1_B_1 (TEMPLATE: 8e8i )

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ALL MOLECULES IN THE BIOLOGICAL UNIT:
[assembly_id:1]

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MOLECULES contact sites
model mark query asym_id oper
(auth_asym_id)
type description a(query A)
1 a A(HLAE_HUMAN) A 1 (A) polymer(polypeptide(L)) [275 aa] MHC class I antigen :R4ZGR5_HUMAN
2 b B 1 (B) polymer(polypeptide(L)) [100 aa] Beta-2-microglobulin :B2MG_HUMAN 29F 30H(D) 31T 33V(M) 46V 48Y 53Q 56R 113S 114H 117Q 118W(S) 119M 136Q 137F(Y) 138A 140D 141G 143D 213H 223R 225W 252V 253E 254T 255R 256P 257A 258G 263Q 265W (identity: 87.1 %/78.2 %)
ALIGNMENTS
MODEL[1] Protein A "queryA" TEMPLATE:8e8i_A_1 identity=78.2%
queryA        22:GSHSLKYFHTSVSRPGRGEPRFISVGYVDDTQFVRFDNDAASPRMVPRAPWMEQEGSEYWDRETRSARDTAQIFRVNLRTLRGYYNQSEAGSHTLQWMHG: 121
                :****  ** *  ************************* ******  ***** **** ***** *       *  *  ** **************** * *:
8e8i_A_1       1:GSHSMRYFDTAMSRPGRGEPRFISVGYVDDTQFVRFDSDAASPREEPRAPWIEQEGPEYWDRNTQIFKTNTQTDRCSLRNLRGYYNQSEAGSHTLQSMYG: 100
SecStr          :  EEEEEEEEEE  TTSSS EEEEEEEETTEEEEEEETT S GGGS B HHHHTT HHHHHHHHHHHHHHHHHHHHHHHHHHHHTT  TTS  EEEEEEE:    
ExpBur          :eebebbbebebebbeeeeebebbbbbebbebebbebbeeeeeeeebeebebbeebeeebbeeebeebeeebeebbeebeebeeeeeeeeeeebebebebb:    
Contact         :       bbb b            b b    b  b                                                        bb  bbb  

queryA       122:CELGPDGRFLRGYEQFAYDGKDYLTLNEDLRSWTAVDTAAQISEQKSNDASEAEHQRAYLEDTCVEWLHKYLEKGKETLLHLEPPKTHVTHHPISDHEAT: 221
                :*  ***** ***  * *******  ********** ******   *   *  **  ***** ******  *** ** **    *****************:
8e8i_A_1     101:CDVGPDGRLLRGHNQYAYDGKDYIALNEDLRSWTAADTAAQITQRKWEAARVAEQDRAYLEGTCVEWLRRYLENGKDTLERADPPKTHVTHHPISDHEAT: 200
SecStr          :EEE TTS EEEEEEEEEETTEEEEEE TTSS EEESSHHHHHHHHHHHHTTHHHHHHHHHHTHHHHHHHHHHHHTHHHHT  B  EEEEEEEE SSSEEE:    
ExpBur          :bebbeebeeeebbbebbbeeeebbebeeebeebebeeebbeebeeebeeeeebeeeeeebebebbebbeebbeebeeebeeebebeeebeeeeeeeeebb:    
Contact         :              bbb bb b                                                                     b        

queryA       222:LRCWALGFYPAEITLTWQQDGEGHTQDTELVETRPAGDGTFQKWAAVVVPSGEEQRYTCHVQHEGLPEPVTLRWK: 296
                :****************** ***  ************** **************************** * **** :
8e8i_A_1     201:LRCWALGFYPAEITLTWQRDGEDQTQDTELVETRPAGDRTFQKWAAVVVPSGEEQRYTCHVQHEGLPKPLTLRWE: 275
SecStr          :EEEEEEEEBSS  EEEEEETTEE GGG EE   EE SSS EEEEEEEEEETT GGGEEEEEE TT SS EEE   :    
ExpBur          :bbbbbebbbbbebebebeeeeeebeeebeeeeeeeeeeebbebbbbbebeeeebeebbbbbebeebeeeeebeee:    
Contact         : b b                          bbbbbbb    b b                                                        


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