[pdbjlvh2]Protein Model on 6mt3_A_1_B

Protein Model on 6mt3_A_1_B_1 (TEMPLATE: 6mt3 )

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ALL MOLECULES IN THE BIOLOGICAL UNIT:
[assembly_id:1]

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MOLECULES						contact sites
model	mark	query	asym_id oper (auth_asym_id)	type	description	a(query A)
1	a	A(HLAE_HUMAN)	A 1 (A)	polymer(polypeptide(L)) [276 aa]	HLA class I histocompatibility antigen, B-18 alpha chain :1B18_HUMAN
2	b		B 1 (B)	polymer(polypeptide(L)) [9 aa]	NP338 peptide	28Y 30H 45S 80Y 83R 84E(N) 87S(I) 91T(N) 94I(T) 97V(E) 98N(S) 101T(N) 105Y 116L 118W(R) 120H(Y) 137F(S) 144Y 164S(T) 167K 168S(W) 171A 173E(V) 176H(Q) 177Q(L) 180Y 184T 188W (identity: 46.4 %/78.6 %)

ALIGNMENTS

MODEL[1] Protein A "queryA" TEMPLATE:6mt3_A_1 identity=78.6%

queryA        22:GSHSLKYFHTSVSRPGRGEPRFISVGYVDDTQFVRFDNDAASPRMVPRAPWMEQEGSEYWDRETRSARDTAQIFRVNLRTLRGYYNQSEAGSHTLQWMHG: 121
                :****  *********************** ******* ******  ***** **** ***** *       *  *  ** **************** * *:
6mt3_A_1       1:GSHSMRYFHTSVSRPGRGEPRFISVGYVDGTQFVRFDSDAASPRTEPRAPWIEQEGPEYWDRNTQISKTNTQTYRESLRNLRGYYNQSEAGSHTLQRMYG: 100
SecStr          :  EEEEEEEEEE  TTSSS EEEEEEEETTEEEEEEETTSSS   EE SGGGTTS HHHHHHHHHHHHHHHHHHHHHHHHHHHHTT  TTS  EEEEEEE:    
ExpBur          :eebbbbbebebebbeeeeebebebebebeebebbebebeeeeeebeeebebbeebeeebbeeebeebeebbeebbeebeebeeeeeeeeeeebebebebb:    
Contact         :      b b              b                                  b  bb  b   b  b  bb  b   b          b b b 

queryA       122:CELGPDGRFLRGYEQFAYDGKDYLTLNEDLRSWTAVDTAAQISEQKSNDASEAEHQRAYLEDTCVEWLHKYLEKGKETLLHLEPPKTHVTHHPISDHEAT: 221
                :*  ***** ***  * *******  ***** **** ******   *   *  **  ***** ******   ** *****    *****************:
6mt3_A_1     101:CDVGPDGRLLRGHDQSAYDGKDYIALNEDLSSWTAADTAAQITQRKWEAARVAEQLRAYLEGTCVEWLRRHLENGKETLQRADPPKTHVTHHPISDHEAT: 200
SecStr          :EEE TTS EEEEEEEEEETTEEEEEE TTSS EEESSHHHHHHHHHHHHTTHHHHHHHHHHTHHHHHHHHHHHHTHHHHT  B  EEEEEEEE SSSEEE:    
ExpBur          :bbbbeebeeeebbbebbbeeeebbbbeeebeebeeeeebbeebbeeeeeeeebeebeeebebebbeebeebbeebeeebeeebebeeebbeeeeeeeebb:    
Contact         :               b      b                   b  bb  b b  bb  b   b   b                                 

queryA       222:LRCWALGFYPAEITLTWQQDGEGHTQDTELVETRPAGDGTFQKWAAVVVPSGEEQRYTCHVQHEGLPEPVTLRWKP: 297
                :****************** ***  ************** **************************** * **** *:
6mt3_A_1     201:LRCWALGFYPAEITLTWQRDGEDQTQDTELVETRPAGDRTFQKWAAVVVPSGEEQRYTCHVQHEGLPKPLTLRWEP: 276
SecStr          :EEEEEEEEBSS  EEEEEETTEE GGG EE   EE SSS EEEEEEEEEETT GGGEEEEEE TT SS EEE    :    
ExpBur          :bbbebebbbeeebebebeeeeeebeeebeeeeeeeeeeebbebbbbbebeeeebeebbbebebeebeeeeebeeee:

Protein Model on 6mt3_A_1_B_1 (TEMPLATE: 6mt3 )

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