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DOWNLOAD: [sequence-replaced 3D model] [for PyMOL] [3D template] [Modeller script]
ALL MOLECULES IN THE BIOLOGICAL UNIT: |
MOLECULES | contact sites | |||||
model | mark | query | asym_id oper (auth_asym_id) |
type | description | a(query A) |
1 | a | A(HLAE_HUMAN) | A 1 (A) | polymer(polypeptide(L)) [274 aa] | MHC class I antigen :F6IQY1_HUMAN | |
2 | b | B 1 (B) | polymer(polypeptide(L)) [99 aa] | Beta-2-microglobulin :B2MG_HUMAN | 29F 30H(Y) 31T 33V 44I 46V 48Y 53Q 56R 69R 115T 117Q 118W(I) 119M 136Q 137F(D) 138A 140D 141G 143D 223R 225W 252V 253E 254T 255R 256P 257A 258G 259D 263Q 265W (identity: 90.6 %/79.6 %) |
ALIGNMENTS |
MODEL[1] Protein A "queryA" TEMPLATE:6id4_A_1 identity=79.6% |
queryA 22:GSHSLKYFHTSVSRPGRGEPRFISVGYVDDTQFVRFDNDAASPRMVPRAPWMEQEGSEYWDRETRSARDTAQIFRVNLRTLRGYYNQSEAGSHTLQWMHG: 121 :**** ** ************** ************* **** ** ***** **** **** *** * ** * ********** **** * * *: 6id4_A_1 2:GSHSMRYFYTSVSRPGRGEPRFIAVGYVDDTQFVRFDSDAASQRMEPRAPWIEQEGPEYWDQETRNVKAQSQTDRVDLGTLRGYYNQSEDGSHTIQIMYG: 101 SecStr : EEEEEEEEEE TTTSS EEEEEEEETTEEEEEEETTSSS S EE STTTTTS HHHHHHHHHHHHHHHHHHHHHHHHHHHHHT TTS EEEEEEE: ExpBur :eebbbebebebebbeeeeeeebebebebbebebbebbbebeeeebbeebebbeebeeebbeebbeebeebbeebeeebeebeeeeeeeeeeebebebbbb: Contact : bbb b b b b b b b b bbb queryA 122:CELGPDGRFLRGYEQFAYDGKDYLTLNEDLRSWTAVDTAAQISEQKSNDASEAEHQRAYLEDTCVEWLHKYLEKGKETLLHLEPPKTHVTHHPISDHEAT: 221 :* ********** * ******* ********** * **** * * ** ****** ***** *** ***** ***** ***********: 6id4_A_1 102:CDVGPDGRFLRGYRQDAYDGKDYIALNEDLRSWTAADMAAQITKRKWEAAHAAEQQRAYLEGRCVEWLRRYLENGKETLQRTDPPKTHMTHHPISDHEAT: 201 SecStr :EEE TTS EEEEEEEEEETTEEEEEE TTSS EEESSHHHHHHHHHHHHHTHHHHHHHHHHTHHHHHHHHHHHHTHHHHT B EEEEEEEE SSSEEE: ExpBur :bbbbeeeeeeebbbebbbeeeebbebeeebeebebeeebbeebeeeeeeeebbeebbebbebebbeebeebbeebeeebeeeeebeeebeeeeeeeeebb: Contact : bbb bb b queryA 222:LRCWALGFYPAEITLTWQQDGEGHTQDTELVETRPAGDGTFQKWAAVVVPSGEEQRYTCHVQHEGLPEPVTLRW: 295 :****************** *** ******************************************* * ****: 6id4_A_1 202:LRCWALGFYPAEITLTWQRDGEDQTQDTELVETRPAGDGTFQKWAAVVVPSGEEQRYTCHVQHEGLPKPLTLRW: 275 SecStr :EEEEEEEEBSS EEEEEETTEE GGGEEE EE SSS EEEEEEEEEETT GGGEEEEEE TT SS EEEE : ExpBur :bbbbbebbbbbebebbbbeeeeebeeebeeeeeeeeeeebbebbbbbebeeeebeebbbbbebebbeeeeeeee: Contact : b b bbbbbbbb b b |