Protein Model on 6at5_A_1_B_1 (TEMPLATE: 6at5 )

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ALL MOLECULES IN THE BIOLOGICAL UNIT:
[assembly_id:1]

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MOLECULES contact sites
model mark query asym_id oper
(auth_asym_id)
type description a(query A)
1 a A(HLAE_HUMAN) A 1 (A) polymer(polypeptide(L)) [275 aa] HLA class I histocompatibility antigen, B-7 alpha chain :1B07_HUMAN
2 b B 1 (B) polymer(polypeptide(L)) [99 aa] Beta-2-microglobulin :B2MG_HUMAN 29F 30H(Y) 31T 33V 44I 46V 48Y 53Q 56R 69R 117Q 118W(S) 119M 136Q 137F(Y) 138A 140D 141G 143D 213H 223R 225W 227L 252V 253E 254T 255R 256P 257A 258G 259D 263Q 265W (identity: 90.9 %/78.9 %)
ALIGNMENTS
MODEL[1] Protein A "queryA" TEMPLATE:6at5_A_1 identity=78.9%
queryA        22:GSHSLKYFHTSVSRPGRGEPRFISVGYVDDTQFVRFDNDAASPRMVPRAPWMEQEGSEYWDRETRSARDTAQIFRVNLRTLRGYYNQSEAGSHTLQWMHG: 121
                :****  ** **************************** ******  ***** **** ***** *      **  *  ** **************** * *:
6at5_A_1      25:GSHSMRYFYTSVSRPGRGEPRFISVGYVDDTQFVRFDSDAASPREEPRAPWIEQEGPEYWDRNTQIYKAQAQTDRESLRNLRGYYNQSEAGSHTLQSMYG: 124
SecStr          :  EEEEEEEEEE  TTS S EEEEEEEETTEEEEEEETTSSS   EE SGGGTTS HHHHHHHHHHHHHHHHHHHHHHHHHHHHTT  SSS  EEEEEEE:    
ExpBur          :eebebbbebebebbeeeeebebebebebeebebbebeeeeeeeebeeebebbeebeeebbeebbeebeeebeebbeebeebeeeeeeeeeeebebebebb:    
Contact         :       bbb b          b b b    b  b            b                                               bbb  

queryA       122:CELGPDGRFLRGYEQFAYDGKDYLTLNEDLRSWTAVDTAAQISEQKSNDASEAEHQRAYLEDTCVEWLHKYLEKGKETLLHLEPPKTHVTHHPISDHEAT: 221
                :*  ***** ***  * *******  ********** ******   *   * ***  *****  *****  *** **  *    *****************:
6at5_A_1     125:CDVGPDGRLLRGHDQYAYDGKDYIALNEDLRSWTAADTAAQITQRKWEAAREAEQRRAYLEGECVEWLRRYLENGKDKLERADPPKTHVTHHPISDHEAT: 224
SecStr          :EEE TT  EEEEEEEEEETTEEEEEE TTSS EEESSHHHHHHHHHHHHTTHHHHHHHHHHTHHHHHHHHHHHHTHHHHT  B  EEEEEEEEEETTEEE:    
ExpBur          :bbbbeebeeeebbbebbbeeeebbebeeebeebebeeebbeebeeebeeeeebeebeeebeeebbeebeebbeebeeebeeebebeeebeeeeeeeeebb:    
Contact         :              bbb bb b                                                                     b        

queryA       222:LRCWALGFYPAEITLTWQQDGEGHTQDTELVETRPAGDGTFQKWAAVVVPSGEEQRYTCHVQHEGLPEPVTLRWK: 296
                :****************** ***  ************** **************************** * **** :
6at5_A_1     225:LRCWALGFYPAEITLTWQRDGEDQTQDTELVETRPAGDRTFQKWAAVVVPSGEEQRYTCHVQHEGLPKPLTLRWE: 299
SecStr          :EEEEEEEEBSS  EEEEEETTEE TTTEEE   EE SSS EEEEEEEEEETT GGGEEEEEE TT SS EEE   :    
ExpBur          :bbbebebbbbbebebebbeeeeebeeebeeeeeeeeeeebbebbbbbebeeeebeebbbbbebeebeeeeebeee:    
Contact         : b b b                        bbbbbbbb   b b                                                        


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