Protein Model on 3ffc_A_1_B_1 (TEMPLATE: 3ffc )

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ALL MOLECULES IN THE BIOLOGICAL UNIT:
[assembly_id:1]

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MOLECULES contact sites
model mark query asym_id oper
(auth_asym_id)
type description a(query A)
1 a A(HLAE_HUMAN) A 1 (A) polymer(polypeptide(L)) [277 aa] HLA class I histocompatibility antigen, B-8 alpha chain :1B08_HUMAN
2 b B 1 (B) polymer(polypeptide(L)) [100 aa] Beta-2-microglobulin :B2MG_HUMAN 27K(R) 29F 30H(D) 31T 33V(M) 38R 44I 46V 48Y 56R 115T 117Q 118W(S) 119M 136Q 137F(Y) 138A 140D 141G 142K 143D 213H 223R 225W 227L 252V 253E 254T 255R 256P 257A 258G 259D 263Q 265W (identity: 85.7 %/78.0 %)
ALIGNMENTS
MODEL[1] Protein A "queryA" TEMPLATE:3ffc_A_1 identity=78.0%
queryA        22:GSHSLKYFHTSVSRPGRGEPRFISVGYVDDTQFVRFDNDAASPRMVPRAPWMEQEGSEYWDRETRSARDTAQIFRVNLRTLRGYYNQSEAGSHTLQWMHG: 121
                :****  ** *  ************************* ******  ***** **** ***** *       *  *  ** **************** * *:
3ffc_A_1       1:GSHSMRYFDTAMSRPGRGEPRFISVGYVDDTQFVRFDSDAASPREEPRAPWIEQEGPEYWDRNTQIFKTNTQTDRESLRNLRGYYNQSEAGSHTLQSMYG: 100
SecStr          :  EEEEEEEEEE  TTTSS EEEEEEEETTEEEEEEESS  SSS     HHHHTS HHHHHHHHHHHHHHHHHHHHHHHHHHHHTT  TTS  EEEEEEE:    
ExpBur          :eebebbbebebebbeeeeebebbbbbebeebebbebbeeeeeeeebeebebbeebeeebbeeeeeebeeebeebeebbeebeeeeeeeeeeebebebebb:    
Contact         :     b bbb b    b     b b b       b                                                          b bbb  

queryA       122:CELGPDGRFLRGYEQFAYDGKDYLTLNEDLRSWTAVDTAAQISEQKSNDASEAEHQRAYLEDTCVEWLHKYLEKGKETLLHLEPPKTHVTHHPISDHEAT: 221
                :*  ***** ***  * *******  ********** ******   *   *  **  ***** ******  *** ** **    *****************:
3ffc_A_1     101:CDVGPDGRLLRGHNQYAYDGKDYIALNEDLRSWTAADTAAQITQRKWEAARVAEQDRAYLEGTCVEWLRRYLENGKDTLERADPPKTHVTHHPISDHEAT: 200
SecStr          :EEE TTS EEEEEEEEEETTEEEEEE TTSS EEESSHHHHHHHHHHHHTTHHHHHHHHHHTHHHHHHHHHHHHTHHHHS  B  EEEEEEEE SSSEEE:    
ExpBur          :bebbeebeeeebbbebbbeeeebbebeeebeebeeeeebbeebeeebeeeebbeeebeebeeebbeebeebbeebeeebeeeeebeeebeeeeeeeeebb:    
Contact         :              bbb bbbb                                                                     b        

queryA       222:LRCWALGFYPAEITLTWQQDGEGHTQDTELVETRPAGDGTFQKWAAVVVPSGEEQRYTCHVQHEGLPEPVTLRWKPA: 298
                :****************** ***  ************** **************************** * **** * :
3ffc_A_1     201:LRCWALGFYPAEITLTWQRDGEDQTQDTELVETRPAGDRTFQKWAAVVVPSGEEQRYTCHVQHEGLPKPLTLRWEPS: 277
SecStr          :EEEEEEEEBSS EEEEEEETTEE SSS EE   EE SSS EEEEEEEEEETT GGGEEEEEEETT SS EEE     :    
ExpBur          :bbbbbeebbbbebebebbeeeeebeeebeebeeeeeeeebbebbbbbebeeeebeebbbebebeebeeeeebeeeee:    
Contact         : b b b                        bbbbbbbb   b b                                                        


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