Protein Model on 2bst_A_1_B_1 (TEMPLATE: 2bst )

CurrentView:HTML5 Change to:[JAVA] DOWNLOAD:
[sequence-replaced 3D model] [for PyMOL]
[3D template]
[Modeller script]

ALL MOLECULES IN THE BIOLOGICAL UNIT:
[assembly_id:1]

Window size :
[small] [medium] [large]

[help]


MOLECULES contact sites
model mark query asym_id oper
(auth_asym_id)
type description a(query A)
1 a A(HLAE_HUMAN) A 1 (A) polymer(polypeptide(L)) [276 aa] HLA CLASS I HISTOCOMPATIBILITY ANTIGEN, B-27 ALPHA CHAIN PRECURSOR :1B27_HUMAN
2 b B 1 (B) polymer(polypeptide(L)) [100 aa] BETA-2-MICROGLOBULIN :B2MG_HUMAN 29F 30H 31T 33V 44I 46V 48Y 56R 113S 114H 117Q 118W(N) 136Q 137F(D) 138A 140D 141G 143D 213H 223R 225W 252V 253E 254T 255R 256P 257A 258G 259D 263Q 265W (identity: 93.5 %/79.0 %)
ALIGNMENTS
MODEL[1] Protein A "queryA" TEMPLATE:2bst_A_1 identity=79.0%
queryA        22:GSHSLKYFHTSVSRPGRGEPRFISVGYVDDTQFVRFDNDAASPRMVPRAPWMEQEGSEYWDRETRSARDTAQIFRVNLRTLRGYYNQSEAGSHTLQWMHG: 121
                :****  ***************** ******* ***** ******  ***** **** *******      **  *  ****  ************* * *:
2bst_A_1       1:GSHSMRYFHTSVSRPGRGEPRFITVGYVDDTLFVRFDSDAASPREEPRAPWIEQEGPEYWDRETQICKAKAQTDREDLRTLLRYYNQSEAGSHTLQNMYG: 100
SecStr          :  EEEEEEEEEE  TTSSS EEEEEEEETTEEEEEEETTSSS   EE SGGGTTS HHHHHHHHHHHHHHHHHHHHHHHHHHHHTT  TTS  EEEEEEE:    
ExpBur          :eebbbbbebebebbeeeeebebebebebbebebbebbbeeeeeebeeebebbeebeeebbeebbeebeeebeebbeebebbbeeeeeeeeeebebebbbb:    
Contact         :       bbb b          b b b       b                                                        bb  bb   

queryA       122:CELGPDGRFLRGYEQFAYDGKDYLTLNEDLRSWTAVDTAAQISEQKSNDASEAEHQRAYLEDTCVEWLHKYLEKGKETLLHLEPPKTHVTHHPISDHEAT: 221
                :*  ***** **** * *******  ***** **** ******   *   *  **  *****  *****  *** *****    *****************:
2bst_A_1     101:CDVGPDGRLLRGYHQDAYDGKDYIALNEDLSSWTAADTAAQITQRKWEAARVAEQLRAYLEGECVEWLRRYLENGKETLQRADPPKTHVTHHPISDHEAT: 200
SecStr          :EEE TTS EEEEEEEEEETTEEEEEE TTSS EEESSHHHHHHHHHHHHTTHHHHHHHHHHTHHHHHHHHHHHHTHHHHT  B  EEEEEEEE SSSEEE:    
ExpBur          :bbbbeeeeeeebbbebbbeeeebbebeeebeebebeeebbeebeeeeeeeebbeebeeebeeebbeebeebbeebeebbeeeeebeeebbeeeeeeeebb:    
Contact         :              bbb bb b                                                                     b        

queryA       222:LRCWALGFYPAEITLTWQQDGEGHTQDTELVETRPAGDGTFQKWAAVVVPSGEEQRYTCHVQHEGLPEPVTLRWKP: 297
                :****************** ***  ************** **************************** * **** *:
2bst_A_1     201:LRCWALGFYPAEITLTWQRDGEDQTQDTELVETRPAGDRTFQKWAAVVVPSGEEQRYTCHVQHEGLPKPLTLRWEP: 276
SecStr          :EEEEEEEEBSS  EEEEEETTEE TTS EE   EE SSS EEEEEEEEEETT GGGEEEEEE TT SS EEE    :    
ExpBur          :bbbebeebbbbebebebeeeeeebeeeeeeeeeeeeeeebbebbbbbebeeeebeebbbbbebeebeeeeebeeee:    
Contact         : b b                          bbbbbbbb   b b                                                        


Input Residue Numbers for Focused Sites

ex) 2,15,123