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DOWNLOAD: [sequence-replaced 3D model] [for PyMOL] [3D template] [Modeller script]
ALL MOLECULES IN THE BIOLOGICAL UNIT: |
MOLECULES | contact sites | |||||
model | mark | query | asym_id oper (auth_asym_id) |
type | description | a(query A) |
1 | a | A(HLAE_HUMAN) | A 1 (A) | polymer(polypeptide(L)) [277 aa] | HLA CLASS I HISTOCOMPATIBILITY ANTIGEN, B-35 B*3501 (ALPHA CHAIN) :1B35_HUMAN | |
2 | b | B 1 (B) | polymer(polypeptide(L)) [100 aa] | BETA-2-MICROGLOBULIN :B2MG_HUMAN | 29F 30H(Y) 31T 33V(M) 46V 48Y 53Q 56R 69R 115T(I) 117Q 118W(R) 119M 136Q 137F(S) 138A 140D 141G 143D 211T 213H 223R 225W 227L 252V 253E 255R 256P 257A 258G 259D 263Q 265W (identity: 84.8 %/76.5 %) |
ALIGNMENTS |
MODEL[1] Protein A "queryA" TEMPLATE:1a9b_A_1 identity=76.5% |
queryA 22:GSHSLKYFHTSVSRPGRGEPRFISVGYVDDTQFVRFDNDAASPRMVPRAPWMEQEGSEYWDRETRSARDTAQIFRVNLRTLRGYYNQSEAGSHTLQWMHG: 121 :**** ** * *********** ************* ****** ***** **** ***** * * * ** ************* * * *: 1a9b_A_1 1:GSHSMRYFYTAMSRPGRGEPRFIAVGYVDDTQFVRFDSDAASPRTEPRAPWIEQEGPEYWDRNTQIFKTNTQTYRESLRNLRGYYNQSEAGSHIIQRMYG: 100 SecStr : EEEEEEEEEEEETTTEEEEEEEEEEETTEEEEEEETTSSS EE SHHHHTS HHHHHHHHHHHHHHHHHHHHHHHHHHHHHT TTS EEEEEEE: ExpBur :eeeebbbebebebbeeeeeeebebbbebeebebbebbbeeeeeebeeebebbeebeeebbeebbeebeeebeebbeebeebbeeeeeeeeeebebebebb: Contact : bbb b b b b b b b bbb queryA 122:CELGPDGRFLRGYEQFAYDGKDYLTLNEDLRSWTAVDTAAQISEQKSNDASEAEHQRAYLEDTCVEWLHKYLEKGKETLLHLEPPKTHVTHHPISDHEAT: 221 :* ****** *** * ******* ***** **** ****** * * ** ***** ***** *** ***** ********** ******: 1a9b_A_1 101:CDLGPDGRLLRGHDQSAYDGKDYIALNEDLSSWTAADTAAQITQRKWEAARVAEQLRAYLEGLCVEWLRRYLENGKETLQRADPPKTHVTHHPVSDHEAT: 200 SecStr :EEE TTSSEEEEEEEEEETTEEEEEE TTSS EEESSHHHHHHHHHHHHTTHHHHHHHHHHTHHHHHHHHHHHHTHHHHTS B EEEEEEEESSSSEEE: ExpBur :bbbbeeeebeebbbebbbeeeebbbbeeebeebeeeeebbeebbeeeeeeebbeebeeebeeebbeebeebbeebeeebeeeeebeeebeeeeeeeeebb: Contact : bbb bb b b b queryA 222:LRCWALGFYPAEITLTWQQDGEGHTQDTELVETRPAGDGTFQKWAAVVVPSGEEQRYTCHVQHEGLPEPVTLRWKPA: 298 :****************** *** ************** **************************** * **** * : 1a9b_A_1 201:LRCWALGFYPAEITLTWQRDGEDQTQDTELVETRPAGDRTFQKWAAVVVPSGEEQRYTCHVQHEGLPKPLTLRWEPS: 277 SecStr :EEEEEEEEBSS EEEEEETTEE TTT EE EE SSS EEEEEEEEEETT GGGEEEEEE TT SS EEE : ExpBur :bbbbbebbbbbebebbbbeeeeebeeebeeeeeeeeeeebbebbbbbebeeeebeebbbebebebbeeeeebeeeee: Contact : b b b bb bbbbb b b |