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DOWNLOAD: [sequence-replaced 3D model] [for PyMOL] [3D template] [Modeller script]
ALL MOLECULES IN THE BIOLOGICAL UNIT: |
MOLECULES | contact sites | |||||
model | mark | query | asym_id oper (auth_asym_id) |
type | description | a(query A) |
1 | a | A(AMPN_HUMAN) | B 1 (B) | polymer(polypeptide(L)) [851 aa] | Leucyl-cystinyl aminopeptidase :LCAP_HUMAN | |
2 | b | T 1 (B) | non-polymer(NAG) | 2-acetamido-2-deoxy-beta-D-glucopyranose | 134G 184G(A) 185E(N) (identity: 33.3 %/35.9 %) |
ALIGNMENTS |
MODEL[1] Protein A "queryA" TEMPLATE:5c97_B_1 identity=35.9% |
queryA 71:WNRYRLPNTLKPDSYRVTLRPYLTPNDRGLYVFKGSSTVRFTCKEATDVIIIHSKKLNYTLSQGHRVVLRGVGGSQPPDIDKTELVEPTEY--LVVHLKG: 168 :* *** * * * * ** * ** * * ** ** ** * * : 5c97_B_1 40:WAQIRLPTAVVPLRYELSLHPNLTS-----MTFRGSVTISVQALQVTWNIILHST--------GHNISRVTFMSAXXXXEKQAEILEYAYHGQIAIVAPE: 126 SecStr : SSS SSEEEEEEEEEEEEETTT-----TEEE EEEEEEESS EEEEEEE --------S EEEE ---- EE EEEEETTTTEEEEEEEE: ExpBur :eeeeebbebbebeebebebebebee-----eebbbebebbbebeeebeebbbbbe--------ebeeeebebbee----ebebebeeeeebbbbbbebee: Contact : b queryA 169:SLVKDSQYEMDSEFEGELADDLAGFYRSEYM-EGNVRKVVATTQMQAADARKSFPCFDEPAMKAEFNITLIHPKDLTALSNMLPKGPSTPLPEDPNWNVT: 267 : * * * *** * * * * * ** ** ******** ** * * * ****** ** * * * : 5c97_B_1 127:ALLAGHNYTLKIEYSANISSSYYGFYGFSYTDESNEKKYFAATQFEPLAARSAFPCFDEPAFKATFIIKIIRDEQYTALSNM-PKKSSVVL--DDGLVQD: 223 SecStr :EE TT EEEEEEE B BSSSSEEEEEEEE SS EEEEEEEE TTTTHHHHS B SSSS BEEEEEEEEESSSEEEESS- EEEEEE --TTSEEEE: ExpBur :bbeeeeebebbbebeeebeeeeebbbbbebebeeeeebebbbbbbbbbbbbbbbbbbbbbebbbbbbbbbbbeeebebbbbb-eeeeeeee--eeebbeb: Contact : bb queryA 268:EFHTTPKMSTYLLAFIVSEFDYVEKQASNGVLIRIWARPSAIAAGHGDYALNVTGPILNFFAGHYDTPYPLPKSDQIGLPDFNAGAMENWGLVTYRENSL: 367 :** ****** **** * * ** * * * * * * *** * * ** *** * * *** ********* * ** *: 5c97_B_1 224:EFSESVKMSTYLVAFIVGEMKNL-SQDVNGTLVSIYAVPEKIGQVH--YALETTVKLLEFFQNYFEIQYPLKKLDLVAIPDFEAGAMENWGLLTFREETL: 320 SecStr :EE SB GGG EEEE EEE-EEESSS EEEEEE GGGTTSSH--HHHHHHHHHHHHHHHHS S SEEEEEEES SS TTEEEEEHHHH: ExpBur :ebeebeebbbbbbbbbbbbbeee-eeeeeebebbbbbbeebbeebe--bbbebbbebbebbbebbeeebebebbbbbbbbbeebbebebbbbbbbebeeb: queryA 368:LFDPLSSSSSNKERVVTVIAHELAHQWFGNLVTIEWWNDLWLNEGFASYVEYLGADYAEPTWNLKDLMVLNDV----YRVMAVDALASSHPLSTPASEIN: 463 :* * ** * *************** ************ ** * * * * * * **** * * : 5c97_B_1 321:LYDSNTSSMADRKLVTKIIAHELAHQWFGNLVTMKWWNDLWLNEGFATFMEYFSLEKI-----FKELSSYEDFLDARFKTMKKDSLNSSHPIS---SSVQ: 412 SecStr : TTT SSTTHHHHHHHHHHHHHHHBTTTEEESSGGG HHHHHHHHHHHHHHHHHH-----SGGG THHHHHHHHHHHHTTTSSSS SS--- : ExpBur :bbeeeebbbeeebebbbbbbbbbbbbbbbbbbbbebbebbbbbbbbbbbbbbebbbee-----eeebbbebbbbebbbebbebbbbeebeebb---eebe: queryA 464:TPAQISELFDAISYSKGASVLRMLSSFLSEDVFKQGLASYLHTFAYQNTIYLNLWDHLQEAVNNRSIQLPTTVRDIMNRWTLQMGFPVITVDTSTGTL--: 561 : ** * ** ** ** * * ** ****** *** * *** * * * * * **** *** ** * : 5c97_B_1 413:SSEQIEEMFDSLSYFKGSSLLLMLKTYLSEDVFQHAVVLYLHNHSYASIQSDDLWDSFNE-VTNQTLD----VKRMMKTWTLQKGFPLVTVQKKGKELFI: 507 SecStr :SSSTTSGGG HHHHHHHHHHHHHHHHHS HHHHHHHHHHHHHHTTTEEE THHHHHHHSS- SSS SS---- TTSTTTSSSSSS EEEEEE SSS EE: ExpBur :eeeebeebeeeebbebbbbbbbbbbeeeeeeebeebbbebbeebbeeebebeebbebbbe-eeeeeee----ebebbebbbeebbbbbbbbeeebebbeb: queryA 562:SQEHFLLDPDSNVTRPSEFNYVWIVPITSIRDGRQQQDYWLIDV--RAQNDLFSTSGNEWVLLNLNVTGYYRVNYDEENWRKIQTQLQRDHSAIPVINRA: 659 : ** * * * * * * * ** * * *** * * * ** **: 5c97_B_1 508:QQERFFLNXXXXXXXXXT-SYLWHIPLSYVTEXXNYSKYQSVSLLDKKSGVINLTEEVLWVKVNINMNGYYIVHYADDDWEALIHQLKINPYVLSDKDRA: 606 SecStr :EEEE --------- - EE EEE -- EEE EE SSEEE SS S EEESGGG SSSEEEE HHHHHHHHHHHHH GGGS HHHHH: ExpBur :ebeebebe---------e-eeebebbbbbbbe--eeeeeeeeebbeeeeeebebeeeeebbbbbbebbbbbbbbbeeebbebbbebbeeebeebebbbbb: queryA 660:QIINDAFNLASAHKVPVTLALNNTLFLIEERQYMPWEAALSSLSYFKLMFDRSEVYGPMKNYLKKQVTPLFIHFRNN----------TNNWREIPENLMD: 749 : ** * ** *** * * * * ** * * * * ** * * * ** * : 5c97_B_1 607:NLINNIFELAGLGKVPLKRAFDLINYLGNENHTAPITEALFQTD---LIYNLLEKLGYM-DLASRLVTRVFKLLQNQIQQQTWTDEGTPSMRELRSALLE: 702 SecStr :HHHHHHHHHHHHT S GGGTTTTGGGGGG HHHHHHHHHHHH---HHHHHHHHHT H-HHHHHHHHHHHTTSHHHHHT SS S HHHHHHHHHHHH: ExpBur :bbbbbbbbbbbeebbebbbbbebbebbeebeebbbbebbbebbe---ebbbbbbbeeee-ebbeebbeebbebbeebbeebebeeeeebbebebbeebbb: queryA 750:QYSEVNAISTACSNGVPECEEMVSGLFKQWMENPNNNPIHPNLRSTVYCNAIAQGGEEEWDFAWEQFRNATLVNEADKLRAALACSKELWILNRYLSYTL: 849 : ** * ** ** ** * * * * *** * * *: 5c97_B_1 703:---------FACTHNLGNCSTTAMKLFDDWMASNGTQSLPTDVMTTVF--KVGAKTDKGWSFLLGKYISIGSEAEKNKILEALASSEDVRKLYWLMKSSL: 791 SecStr :---------HHHHTT TTHHHHHHHHHHHHHHTTT S TTSTTTHH--HHHTTSHHHHHHHHHHHTT TTGGGHHHHHHTT S HHHHHHHHHHHH: ExpBur :---------bbbebebeebeeebeeebeebeeeeeeeebebbbbbbbb--bbbbeeeebbbbbeebbeeeeebebbeebbbbbbbbeeeebbeebbebbb: queryA 850:NPDLIRKQDATSTIISITNNVIGQGLVWDFVQSNWKKLFNDYGGGSFSFSNLIQAVTRRFSTEYELQQLEQFKKDNEETGFGSGTRALEQALEKTKANIK: 949 :* * * * * * * **** ** ** ** * * *** * * * * * *** ** : 5c97_B_1 792:NGDNFRTQKLSFIIRTVGRHFPGHLLAWDFVKENWNKLVQKFPLGSYTIQNIVAGSTYLFSTKTHLSEVQAFFENQSEATF--RLRCVQEALEVIQLNIQ: 889 SecStr :HTSSS GGGHHHHHHHHTTSHHHHHHHHHHHHHTHHHHHHHS TTSTHHHHHHHHHHTT HHHHHHHHHHHHTT HHHH--TSHHHHHHHHHHHHHHH: ExpBur :eeeebeeebbbebbebbbeeeebbeebbebbbeebeebeeebeeeeeebbebbebbbebbbeeebbeebeebbeeeeeebe--eeeebebbbbebebbee: queryA 950:WVKENKEVVLQWF: 962 :* * * : 5c97_B_1 890:WMEKNLKSLTWWL: 902 SecStr :HHHHHHHHHTTT : ExpBur :bbbebbebbeebb: |