CurrentView:HTML5 Change to:[JAVA] |
DOWNLOAD: [sequence-replaced 3D model] [for PyMOL] [3D template] [Modeller script]
ALL MOLECULES IN THE BIOLOGICAL UNIT: |
MOLECULES | contact sites | |||||
model | mark | query | asym_id oper (auth_asym_id) |
type | description | a(query A) |
1 | a | A(AMPN_HUMAN) | B 1 (B) | polymer(polypeptide(L)) [900 aa] | Aminopeptidase N :AMPN_PIG | |
2 | b | S 1 (B) | non-polymer(NAG) | 2-acetamido-2-deoxy-beta-D-glucopyranose | 102V(I) 128N 183E(Q) 184G 185E (identity: 60.0 %/79.3 %) |
ALIGNMENTS |
MODEL[1] Protein A "queryA" TEMPLATE:4f5c_B_1 identity=79.3% |
queryA 64:TLDQSKAWNRYRLPNTLKPDSYRVTLRPYLTPNDRGLYVFKGSSTVRFTCKEATDVIIIHSKKLNYTLSQGHRVVLRGVGGSQPPDIDKTELVEPTEYLV: 163 :****** ******* ** **** ********** *** *** * *** * * ************** ******* ** * ** ***** *****: 4f5c_B_1 42:TLDQSKPWNRYRLPTTLLPDSYNVTLRPYLTPNADGLYIFKGKSIVRFICQEPTDVIIIHSKKLNYTXXX-XMVVLRGVGDSQVPEIDRTELVELTEYLV: 140 SecStr : SSTTSSSS TTEEEEEEEEEEEEEEEEETTTEEEEEEEEEEEEEESS EEEEEEE S EE ----- EEEE TT EE EETTTTEEE: ExpBur :eeeeeeebbeeebeebbebebbebebbbbbeeeeeeebebebebebebebeeebebbbbbbeebebe-----ebebeeeeebeeeeeeeeeebeebbbbb: Contact : b b queryA 164:VHLKGSLVKDSQYEMDSEFEGELADDLAGFYRSEYMEGNVRKVVATTQMQAADARKSFPCFDEPAMKAEFNITLIHPKDLTALSNMLPKGPSTPLPEDPN: 263 :******* *** *** ******************** ** ****** **************** ******** ******* *** **** ****: 4f5c_B_1 141:VHLKGSLQPGHMYEMESEFQGELADDLAGFYRSEYMEGNVKKVLATTQMQSTDARKSFPCFDEPAMKATFNITLIHPNNLTALSNMPPKGSSTPLAEDPN: 240 SecStr :EEEEEEE TT EEEEEEEEEEE SSSSEEEEEEEEETTEEEEEEEEE SSS STTTS B SSSS BEEEEEEEEETTSEEEESS BSSS EE SSSTT: ExpBur :bbbeeebeeeeebebebebebebbeeebbbbbbebeeeeeebebbbbbbbbbbbbbbbbbbbbbebbbebebbbbbeeebebbbbbbeeeeeeebeeeee: Contact : bbb queryA 264:WNVTEFHTTPKMSTYLLAFIVSEFDYVEKQASNGVLIRIWARPSAIAAGHGDYALNVTGPILNFFAGHYDTPYPLPKSDQIGLPDFNAGAMENWGLVTYR: 363 :* **** *** ******* ***** * * *********** *** *** ************** ** * ********* ******************: 4f5c_B_1 241:WSVTEFETTPVMSTYLLAYIVSEFQSVNETAQNGVLIRIWARPNAIAEGHGMYALNVTGPILNFFANHYNTSYPLPKSDQIALPDFNAGAMENWGLVTYR: 340 SecStr :EEEEEB SB SSS EEEES EEEEEE TTS EEEEEE HHHHHTGGGTHHHHTHHHHHHHHHHHTTS SSSEEEEEEESS SSSEE TTEEEEE: ExpBur :bbbbebeebeebbbbbbbbbbbebeebeeebeeebebebbbebebbeeebbebbbebbbebbebbeebbebebbbebbbbbbbeebeeebbbbbbbbbbe: queryA 364:ENSLLFDPLSSSSSNKERVVTVIAHELAHQWFGNLVTIEWWNDLWLNEGFASYVEYLGADYAEPTWNLKDLMVLNDVYRVMAVDALASSHPLSTPASEIN: 463 :** ***** *** ************************ ********************* ********** * ***************** *** * *: 4f5c_B_1 341:ENALLFDPQSSSISNKERVVTVIAHELAHQWFGNLVTLAWWNDLWLNEGFASYVEYLGADHAEPTWNLKDLIVPGDVYRVMAVDALASSHPLTTPAEEVN: 440 SecStr :HHHH TTT HHHHHHHHHHHHHHHHTTTBTTTEEESSGGGHHHHHHHHHHHHHHHHHHHSTTS GGGGHHHHTHHHHHTTTTSTT S GGG : ExpBur :bebbbbbeebbbbebeeebbbbbbbbbbbbbbbbbbbbebbbbbbbbbbbbbbbbbbbbeebbeebebeebbbbebbbebbeebbeeebebbbeeeeebe: queryA 464:TPAQISELFDAISYSKGASVLRMLSSFLSEDVFKQGLASYLHTFAYQNTIYLNLWDHLQEAVNNR-SIQLPTTVRDIMNRWTLQMGFPVITVDTSTGTLS: 562 :******* ** ********* **** ** ** ** ******* ****** ** ** *** ** ** ** *** ** *************** ** *: 4f5c_B_1 441:TPAQISEMFDSISYSKGASVIRMLSNFLTEDLFKEGLASYLHAFAYQNTTYLDLWEHLQKAVDAQTSIRLPDTVRAIMDRWTLQMGFPVITVDTKTGNIS: 540 SecStr :SHHHHHTT SHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHTTEEE THHHHHHHHHHHTT SSS SS HHHHHHHHHSS S EEEEEETTTTEEE: ExpBur :eeeebeebeeebbebbbbbbbbbbbebbeeebbeebbbebbeeebeeebebebbbebbbebbeebeebebeeebebbbbbbbebbbbbbbebebeebebe: queryA 563:QEHFLLDPDSNVTRPSEFNYVWIVPITSIRDGRQQQDYWLIDV-RAQNDLFSTSGNEWVLLNLNVTGYYRVNYDEENWRKIQTQLQRDHSAIPVINRAQI: 661 :* ***** ***** * * * ***** ** * * *** ** ****** * ***** ***** ***** *** ** *** * ******** : 4f5c_B_1 541:QKHFLLDSESNVTRSSAFDYLWIVPISSIKNGVMQDHYWLRDVSQAQNDLFKTASDDWVLLNVNVTGYFQVNYDEDNWRMIQHQLQTNLSVIPVINRAQV: 640 SecStr :EEE SSSS TTSS EEE EEETTEE EEE SSSEEE GGG SS EEESGGG SSSEEEE TTHHHHHHHHHHS GGGS HHHHHHH: ExpBur :bebbbbeeeeeeeeeeeeebbbbbbbbbbeeeeebeebbbeeeeeeeeebbeeeeeebbbbbbebbbbbbbbbeeebbeebbebbeeebeebebbbbbbb: queryA 662:INDAFNLASAHKVPVTLALNNTLFLIEERQYMPWEAALSSLSYFKLMFDRSEVYGPMKNYLKKQVTPLFIHFRNNTNNWREIPENLMDQYSEVNAISTAC: 761 :* * **** ** ******* ***** * **** ********* ************* ** *** *** ** * ** * ********** *******: 4f5c_B_1 641:IYDSFNLATAHMVPVTLALDNTLFLNGEKEYMPWQAALSSLSYFSLMFDRSEVYGPMKKYLRKQVEPLFQHFETLTKNWTERPENLMDQYSEINAISTAC: 740 SecStr :HHHHHHHHHHTSS HHHHHHTTGGGGG HHHHHHHHHHHTTHHHHSTTSTTHHHHHHHHHHHHHHHHHHHHHHTTTTTS SSHHHHHHHHHHHHHHH: ExpBur :bbbbbebbebeebebebbbebbbbbeebeebbbbebbbeebeebebbbbeeebeebbeebbeebbeebbeebeeebeebeebbebbbebbbbebbbebbb: queryA 762:SNGVPECEEMVSGLFKQWMENPNNNPIHPNLRSTVYCNAIAQGGEEEWDFAWEQFRNATLVNEADKLRAALACSKELWILNRYLSYTLNPDLIRKQDATS: 861 :*** * ** ** *** * *********** ********* ***** * * ********* ***** * * ***** ***************: 4f5c_B_1 741:SNGLPQCENLAKTLFDQWMSDPENNPIHPNLRSTIYCNAIAQGGQDQWDFAWGQLQQAQLVNEADKLRSALACSNEVWLLNRYLGYTLNPDLIRKQDATS: 840 SecStr :HTT HHHHHHHHHHHHHHHTSTTS S HHHHHHHHHHHTTTS HHHHHHHHHHHHH SHHHHHHHHHHGGG HHHHHHHHHHTT TTTS HHHHHH: ExpBur :ebebeebeebbeebbeebeeeeeeeebebbbbebbbebbbeeeeeebbebbbebbeeeeeeebbebbbebbbbbeeeebbeebbeebbeeebbeeeebbe: queryA 862:TIISITNNVIGQGLVWDFVQSNWKKLFNDYGGGSFSFSNLIQAVTRRFSTEYELQQLEQFKKDNEETGFGSGTRALEQALEKTKANIKWVKENKEVVLQW: 961 :** ** ***** * ************ *** ********* ****** * ********** * ******************************* *: 4f5c_B_1 841:TINSIASNVIGQPLAWDFVQSNWKKLFQDYGXXSFSFSNLIQGVTRRFSSEFELQQLEQFKKNNMDVGFGSGTRALEQALEKTKANIKWVKENKEVVLNW: 940 SecStr :HHHHHHTSTTHHHHHHHHHHHSHHHHHHTT -- HHHHHHHHGGG SHHHHHHHHHHHHHT SS TTTHHHHHHHHHHHHHHHHHHHHHHHHHHH: ExpBur :bbbebbebeebbebbbebbeeebeebeeeee--ebebeebbebbbebbbeeebbeebeebeeebeeeebeeeeebbeebbeebeebbebbeebeeebbeb: queryA 962:FTENS: 966 :* * *: 4f5c_B_1 941:FIEHS: 945 SecStr :HHHTT: ExpBur :beeeb: |